Bioconductor Big data

Showing : Big data • reset

votes

replies

1.3k

views

NGS R statistics genomics big data Job

5.2 years ago • updated 4.4 years ago Luo Weijun ★ 1.6k

votes

replies

863

views

computational genomic big data bioinformatics Job

4.9 years ago jmaanaki • 0

votes

replies

946

views

computational biology biostatistics big data data science drug discovery Job

5.2 years ago Thomas Girke ★ 1.7k

vote

replies

918

views

big data methylmix memory problem

updated 5.7 years ago by Martin Morgan 25k • written 5.7 years ago by perdedorium • 0

vote

1.1k

views

Rle Big data coverageByTranscript

6.0 years ago hauken_heyken ▴ 80

votes

replies

1.3k

views

wgcna transcriptome big data metagenomics gene expression

6.2 years ago jol.espinoz ▴ 40

votes

1.3k

views

roadmap project annotationhub epigenomics big data

updated 8.0 years ago by Valerie Obenchain ★ 6.8k • written 8.0 years ago by kevin.rue ▴ 350

votes

replies

2.1k

views

Probabilistic Algorithms Big Data Job

9.0 years ago Doe, Aimee ▴ 40

8 results • Page 1 of 1

Recent ...

Replies

Answer: log2FoldChange value is way too different when compared with counts(dds) by Michael Love 41k

This has been asked before, but with a multi factor design, the LFC for coefficient X adjust for the others, in a way that is often hard to…

Answer: Get genomic coordinates of CpGs sites (chromosomes, genomic position) by James W. MacDonald 65k

You don't say what array that is, so I will guess. ``` > library(IlluminaHumanMethylationEPICanno.ilm10b4.hg19) > Locations DataFrame…

Answer: SGSeq: moving toward diffex from SGSeq analysis by Leonard Goldstein ▴ 200

`vid` and `eid` are unique identifiers for splice variants and splicing events respectively. They are analogous to exon bin and gene identi…

Comment: Help with error using camera() in limma by Chris • 0

Thanks James! I fixed the error. I try gene symbol instead of entrez and it worked.

Comment: limma for gene expression analysis with big and unbalanced sample size by XW • 0

Could you explain more about the comment "there are no problems with using limma for unbalanced data sets" ? thanks.

Votes

SPIA plotP giving error

Answer: Fold change calculation in Diffbind vs. DESEQ2?

C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB

C: Extremely big genes in annotation TxDb packages

Make custom Txdb class objects from Txdb

Awards • All