Bioconductor Big data

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1.5k

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NGS R statistics genomics big data Job

6.1 years ago • updated 5.3 years ago Luo Weijun ★ 1.6k

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1.1k

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computational genomic big data bioinformatics Job

5.8 years ago jmaanaki • 0

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1.2k

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computational biology biostatistics big data data science drug discovery Job

6.1 years ago Thomas Girke ★ 1.7k

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1.2k

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big data methylmix memory problem

updated 6.6 years ago by Martin Morgan 25k • written 6.6 years ago by perdedorium • 0

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1.4k

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Rle Big data coverageByTranscript

6.9 years ago hauken_heyken ▴ 80

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1.6k

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wgcna transcriptome big data metagenomics gene expression

7.1 years ago jol.espinoz ▴ 40

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1.6k

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roadmap project annotationhub epigenomics big data

updated 8.9 years ago by Valerie Obenchain ★ 6.8k • written 8.9 years ago by kevin.rue ▴ 350

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2.4k

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Probabilistic Algorithms Big Data Job

9.9 years ago Doe, Aimee ▴ 40

8 results • Page 1 of 1

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Comment: Annotation package for Manduca sexta by GA ▴ 10

Thank you!

Comment: Improving performance of edgeR and limma while adjusting for multiple confounder by ATpoint ★ 4.8k

If 2 minutes is inacceptable to you then you can still fall back to limma-trend which should give a dramatic speedup and finish in seconds.…

Comment: getBM from biomaRt inconsistencies found with .gtf files across multiple species by Mike Smith ★ 6.6k

Great, thanks for the update from Ensembl. So the most relevant part of 'Location: Scaffold HG1277_PATCH: 137,021-141,806 forward strand' …

Answer: Improving performance of edgeR and limma while adjusting for multiple confounder by Gordon Smyth 52k

We recommend that you use voomLmFit() instead of voom+lmFit. We are pretty proud of the speed of glmQLFit and voom, and we hadn't expected…

Answer: Merging EPICV1 and V2 betas by James W. MacDonald 68k

It appears that [SeSAMe][1] has functions meant to do that sort of thing. [1]: https://bioconductor.org/packages/release/bioc/vignet…

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Looking for equivalent EPIC chip v1 vs. v2 annotation variables

Properly constructing a hypergeometric test

A: Is logFC a log2 fold change or some other base in scran::findMarkers

Comment: Error in retrieving clinical data

What is the cheapest day to fly on American Airlines? {Ask_Expert}

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