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Bioc
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BioC happening in 2018?
BioC
2018
Course
6.8 years ago
s.munster
▴ 40
0
votes
1
reply
1.6k
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Errors installing RforProteomics
Bioc
package installation
rforproteomics
updated 8.2 years ago by
Laurent Gatto
1.6k • written 8.2 years ago by
sarahgrogan
• 0
0
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1
reply
1.9k
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Multiple R versions
R
bioc
updated 5.2 years ago by
Martin Morgan
25k • written 5.2 years ago by
pawan12394
• 0
0
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1
reply
832
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JAVA_HOME cannot be determined on Windows on Bioconductor platform report
bioc
Bioconductor
updated 2.6 years ago by
Hervé Pagès
16k • written 2.6 years ago by
cannin
▴ 20
1
vote
2
replies
667
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News:
Win 1 of 50 free virtual registrations to BioC Asia 2022 (Dec 1-2, 2022)
Asia
BioCAsia
Conferences
Events
BioC
written 18 months ago by
Peter Hickey
▴ 740
0
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2
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497
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can't update bioconductor 3.18
BioCor
bioc
BiocVersion
6 months ago
feifan
• 0
6 results • Page
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Answer: Identifying DEGs using limma - NanoString GeoMx-NGS RNA Expression Data
by
James W. MacDonald
66k
Yes, you can use `limma`.
Comment: Ensembl plants at annotationHub?
by
Johannes Rainer
★ 2.0k
You can get the `EnsDb` EnsDb.Taestivum.v112.sqlite (for Ensembl 112/ ensemblgenomes 59) [here](https://www.dropbox.com/sh/msic0luivbldmb7/…
Answer: Errors in chromosome annotation-biomaRt
by
James W. MacDonald
66k
If you are just using HGNC symbols for the lookup, and you are trying to get NCBI IDs, then I wouldn't use `biomaRt` because it's based on …
Comment: Help with ENmix readidat
by
James W. MacDonald
66k
Please don't add to posts from two years ago. Instead make a new post. Also, please read the help page for `readidat`. The only reason to …
Comment: LRT, more than two conditions and pairwise comparisons
by
James W. MacDonald
66k
In that case, probably easiest to subset to the groups being compared.
Votes
how to control age and gender effect in expression data using DESeq2
Answer: Error retrieving ensembl gene id using biomaRt...
Comment: LRT, more than two conditions and pairwise comparisons
Answer: Control group between 2 batches have different expression in RNAseq data
Answer: How to remove batch effect to combine RNAseq data from 2 different experiments?
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