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News: Reminder: BioC2023 in-person registration closes 19th July!
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2.2 years ago Maria Doyle ▴ 100
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News: May 31st is the last day to nominate for Bioc2023 Awards!
Bioconductor Awards Bioc2023 Recognition
2.3 years ago shepherl 4.2k
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News: Reminder: BioC2023, Awards, TAB Deadline approaching - May 31st!
Bioconductor Community BioC2023
2.3 years ago Maria Doyle ▴ 100
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News: Last Week to Nominate for Bioc2023 Awards!
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News: Junior Developer or New Package Developer Award
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News: Bioconductor Community Engagement, Outreach, and Diversity Award
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2.4 years ago • updated 2.3 years ago shepherl 4.2k
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News: Bioconductor Long-term Contribution Award
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2.4 years ago • updated 2.3 years ago shepherl 4.2k
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News: Nominations for Bioconductor 2023 Awards!
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2.4 years ago • updated 2.3 years ago shepherl 4.2k
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News: BioC2023 abstract submission is now open!
presentation BioC2023 Conference community Bioconductor
updated 13 months ago by • 0 • written 2.6 years ago by ▴ 100
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News: Seeking members for BioC2023 organizing committee
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2.6 years ago Maria Doyle ▴ 100
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News: Save the Date Bioc2023!
Bioc2023 Conference Bioconductor
2.8 years ago shepherl 4.2k
11 results • Page 1 of 1
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Comment: Average biological replicates in RNA-seq by boczniak767 ▴ 740
@atpoint Should I first standardise data and then average replicates?
Comment: 3-factor DESeq2 trime-series analysis by gogeni5529 • 0
Thans you @swbarnes2 for the answer. I can see why trying to include all three parameters might be difficult to interpret. But we're inte…
Comment: 3-factor DESeq2 trime-series analysis by swbarnes2 ★ 1.4k
What does your PCA look like? A lot of times, I find that different cell lines are so different from each other, that they should not be d…
Answer: Can I set the normalizationFactors of DEseq2 object as 1 after using RUVg? by yongjie.wang • 0
Thanks for your reply. " normFactors <- exp(-1 * offst(set2)) normFactors <- normFactors / exp(rowMeans(log(normFactors))) normalizat…
Answer: Can I set the normalizationFactors of DEseq2 object as 1 after using RUVg? by Michael Love 43k
I'm not familiar with this usage, or code here ``` normFactors <- exp(-1 * offst(set2)) ``` In the RNA-seq gene-level workflow, we …
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Answer: Limpa Pipeline Order
A: How barcode-plot enrichment is calculated?
A: How barcode-plot enrichment is calculated?
Answer: ROAST compare results with complex design
How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?
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