Showing : Bioc2023 • reset
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News: Reminder: BioC2023 in-person registration closes 19th July!
Bioconductor BioC2023 Conference
2.4 years ago Maria Doyle ▴ 110
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News: May 31st is the last day to nominate for Bioc2023 Awards!
Bioconductor Awards Bioc2023 Recognition
2.6 years ago shepherl 4.2k
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News: Reminder: BioC2023, Awards, TAB Deadline approaching - May 31st!
Bioconductor Community BioC2023
2.6 years ago Maria Doyle ▴ 110
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News: Last Week to Nominate for Bioc2023 Awards!
Bioconductor Bioc2023 Recognition Awards
2.6 years ago shepherl 4.2k
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News: Junior Developer or New Package Developer Award
Bioconductor Recognition Bioc2023 Awards
2.6 years ago shepherl 4.2k
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News: Bioconductor Community Engagement, Outreach, and Diversity Award
Awards Bioconductor Bioc2023 Recognition
2.7 years ago • updated 2.6 years ago shepherl 4.2k
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News: Bioconductor Long-term Contribution Award
Bioc2023 Bioconductor Awards Recognition
2.6 years ago shepherl 4.2k
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News: Nominations for Bioconductor 2023 Awards!
Awards Bioconductor Bioc2023 Recognition
2.7 years ago • updated 2.6 years ago shepherl 4.2k
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News: BioC2023 abstract submission is now open!
presentation BioC2023 Conference community Bioconductor
updated 16 months ago by • 0 • written 2.9 years ago by ▴ 110
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News: Seeking members for BioC2023 organizing committee
BioC2023 Bioconductor community
2.9 years ago Maria Doyle ▴ 110
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News: Save the Date Bioc2023!
Bioc2023 Conference Bioconductor
3.1 years ago shepherl 4.2k
11 results • Page 1 of 1
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Answer: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink by victor04052024 • 0
The information is interesting, and your writing is excellent. I will provide you a link to my website [Baseball bros](https://baseball-gam…
Comment: segfault in edgeR glmQLFit by Gordon Smyth 53k
We have committed a bug fix now to edgeR on both the release and developmental Bioconductor repositories.
Answer: Ensembl site unresponsive via biomaRt by horaortiz8 • 0
I appreciate the link. I'll get in touch with them directly; I wish they had a status page of some kind. https://www.ensembl.org/Help/Cont…
Comment: segfault in edgeR glmQLFit by Mark • 0
Thanks! We had been considering some of these adjustments as well, given the small number of features and total reads. Your advice is well-…
Answer: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink by ATpoint ★ 5.0k
> and I first used the normalized counts You would not use these normalized counts for PCA as they're not on log2 scale. As such, the feat…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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Popular Question to Gordon Smyth 53k
Popular Question to Vincent J. Carey, Jr. 6.7k
Popular Question to Istvan Albert ▴ 50
Popular Question to Dario Strbenac ★ 1.6k
Scholar to Nikos Ignatiadis ▴ 180
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