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1.5k

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txdb granges cds orf R

updated 5.5 years ago by James W. MacDonald 64k • written 5.5 years ago by q.thomas • 0

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Annotatr CDS Exon UTR

updated 5.8 years ago by rcavalca ▴ 140 • written 5.8 years ago by xie186 • 0

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1.5k

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genomeintervals UTRs exons CDS GenomicRanges

updated 6.3 years ago by Michael Lawrence 11k • written 6.3 years ago by rubi ▴ 110

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1.7k

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biomart bioconductor grangeslist cds ribosome profiling

updated 6.5 years ago by Hervé Pagès 16k • written 6.5 years ago by Walter F. Baumann ▴ 10

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2.2k

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genomicfeatures txdb.hsapiens.ucsc.hg19.knowngene cds

7.2 years ago madsheilskov • 0

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1.7k

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cds

8.0 years ago KB ▴ 50

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genomicfeatures genomicranges cds overlap

updated 8.0 years ago by Michael Lawrence 11k • written 8.0 years ago by madsheilskov • 0

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1.2k

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genomicfeatures genomicranges cds overlap

updated 2.0 years ago by balajee • 0 • written 8.0 years ago by madsheilskov • 0

8 results • Page 1 of 1

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Comment: GOslim missing GO term by amanda • 0

Thank you for the advice and many thanks! It is WGCNA analysis. I will try your method today and see if there are some consistencies.

Comment: GOslim missing GO term by James W. MacDonald 64k

Is this a WGCNA analysis (multiple co-expression clusters sounds like WGCNA)? If so, none of that is inferential or easily interpreted. It …

Comment: GOslim missing GO term by amanda • 0

For each group, I generated multiple co-expression clusters, and within each cluster, cluster PC1 was correlated with PC1 of multiple clini…

Comment: GOslim missing GO term by James W. MacDonald 64k

What do you mean by 'enriched with ... GO terms from their correlations with clinical traits'? Are you doing a GO hypergeometric or somethi…

Comment: GOslim missing GO term by amanda • 0

I have multiple groups to compare with, and each enriched with hundreds of GO terms from their correlations with clinical traits (top1 pval…

Votes

Comment: Why is DMRcate not available for Bioconductor version 3.18?

Comment: limma::voom vs edgeR::voomLmFit - when to use?

Answer: limma::voom vs edgeR::voomLmFit - when to use?

Awards • All

Scholar to James W. MacDonald 64k

Scholar to Assa Yeroslaviz ★ 1.5k