Showing : ChAMPdata • reset
2
votes
10
replies
4.6k
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Problem at champ.load
ChAMPdata ChAMP
updated 9 months ago by • 0 • written 2.7 years ago by • 0
0
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0
replies
577
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Errors trying to load EPIC v2 data in ChAMP
ChAMP ChAMPdata
13 months ago elgomez • 0
2
votes
7
replies
4.1k
views
Annotation for EPICv2
EpicV2 ChAMPdata
updated 13 months ago by • 0 • written 14 months ago by • 0
2
votes
4
replies
1.6k
views
Error EPICv2 ChAMP
ChAMPdata IlluminaHumanMethylationEPICv2anno.20a1.hg38 ChAMP
updated 20 months ago by 68k • written 20 months ago by • 0
0
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0
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723
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how to solve this error?
ChAMPdata ChAMP
22 months ago Meghana • 0
0
votes
2
replies
2.0k
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Trouble Loading Data into Champ
loaddata ChAMPdata champload R ChAMP
updated 2.5 years ago by • 0 • written 4.8 years ago by • 0
0
votes
1
reply
1.3k
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Error in ChAMP GUI
ChAMP shiny ChAMPdata
updated 3.8 years ago by • 0 • written 3.8 years ago by • 0
0
votes
3
replies
1.6k
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Wrong terminology used on champ.load() output of ChAMP package?
ChAMPdata ChAMP
updated 4.0 years ago by ▴ 780 • written 4.0 years ago by • 0
0
votes
3
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2.0k
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Why the order of sample names in the beta matrix affect the analysis results of Champ.DMP? What should I do?
ChAMP limma Bioconductor ChAMPdata
updated 10 months ago by • 0 • written 4.3 years ago by • 0
2
votes
1
reply
1.8k
views
How to download the ChAMP dependency ChAMPdata
ChAMP ChAMPdata
updated 4.6 years ago by 4.2k • written 4.6 years ago by ▴ 10
0
votes
2
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1.4k
views
Error myDMP not found
Illumina methylationArrayAnalysis ChAMPdata ChAMP
4.9 years ago sissialva21 • 0
11 results • Page 1 of 1
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Answer: NUPOP usage by shepherl 4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment by Michael Love 43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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