Bioconductor ChAMPdata

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ChAMPdata ChAMP

updated 9 months ago by Josh • 0 • written 2.7 years ago by angel • 0

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581

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ChAMP ChAMPdata

13 months ago elgomez • 0

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4.1k

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EpicV2 ChAMPdata

updated 13 months ago by icecreamlover • 0 • written 14 months ago by nurkenber • 0

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1.6k

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ChAMPdata IlluminaHumanMethylationEPICv2anno.20a1.hg38 ChAMP

updated 20 months ago by James W. MacDonald 68k • written 20 months ago by Mirella Aurora • 0

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726

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ChAMPdata ChAMP

22 months ago Meghana • 0

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loaddata ChAMPdata champload R ChAMP

updated 2.6 years ago by hfbarrerat • 0 • written 4.8 years ago by Bethan • 0

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1.3k

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ChAMP shiny ChAMPdata

updated 3.8 years ago by anna.stanislawska • 0 • written 3.8 years ago by Mari • 0

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1.6k

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ChAMPdata ChAMP

updated 4.0 years ago by Basti ▴ 780 • written 4.0 years ago by mariat • 0

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2.0k

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ChAMP limma Bioconductor ChAMPdata

updated 10 months ago by 81becky • 0 • written 4.3 years ago by Jinyue • 0

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1.8k

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ChAMP ChAMPdata

updated 4.6 years ago by shepherl 4.2k • written 4.6 years ago by Federica ▴ 10

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Illumina methylationArrayAnalysis ChAMPdata ChAMP

4.9 years ago sissialva21 • 0

11 results • Page 1 of 1

Recent ...

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Answer: segfault in edgeR glmQLFit by Gordon Smyth 53k

Dear Mark, Thank you for providing a reproducible example. I confirm that I can reproduce the segfault myself on my own computer. We will …

Answer: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink by aqeel • 0

Discover the pinnacle of Brazilian Jiu Jitsu gear at [Dragon][1] GI. [1]: https://dragongi.com/

Comment: How does contrasts.fit do in limma to extract comparisons with a model having in by Gordon Smyth 53k

I refered you to the DiffVar package 11 months ago. Did you consider it? Your clarification makes it clear that your issue is not with lim…

Comment: How does contrasts.fit do in limma to extract comparisons with a model having in by jtsy6383 • 0

Thanks for the reply Gordon. I am also working on the project and have been tasked to reformulate and add some details. We're interested i…

Answer: How does contrasts.fit do in limma to extract comparisons with a model having in by Gordon Smyth 53k

The limma Users Guide explains how to test for interactions or to test for contrasts very easily. limma can work with any design matrix, bu…

Votes

C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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