Bioconductor DNAStringSet

Showing : DNAStringSet • reset

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1.1k

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dnastringset dnastringsetlist seqnames

7.0 years ago s.ghignone ▴ 10

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4.4k

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dnastringset list stringset

updated 8.4 years ago by Martin Morgan 25k • written 8.4 years ago by vinod.acear ▴ 50

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5.6k

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subseq Xvector dnastringset

updated 8.5 years ago by Hervé Pagès 16k • written 8.5 years ago by Sophie • 0

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1.3k

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dnastringset aastringset

8.7 years ago XIA.PAN ▴ 20

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7.2k

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DNAstringset

updated 8.7 years ago by Hervé Pagès 16k • written 8.7 years ago by XIA.PAN ▴ 20

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6.2k

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dnastringset getseq

updated 9.3 years ago by Hervé Pagès 16k • written 9.3 years ago by TimothéeFlutre ▴ 80

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2.3k

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pwmenrich dnastringset

updated 9.6 years ago by Robert Stojnic ▴ 50 • written 9.6 years ago by sekawaiwai2006 ▴ 20

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1.8k

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dnastringset parallel iterators

9.9 years ago ben.ward ▴ 30

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1.5k

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DNAStringSet sample

updated 10.0 years ago by Hervé Pagès 16k • written 10.0 years ago by vinod.acear ▴ 50

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20k

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dnastringset

updated 10.0 years ago by Martin Morgan 25k • written 10.0 years ago by komal.rathi ▴ 120

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2.4k

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vcf testthat dnastringset

10.0 years ago TimothéeFlutre ▴ 80

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5.2k

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readVcf DNAStringSet DNAStringSetList variantannotation readvcf

10.5 years ago dan.gatti • 0

12 results • Page 1 of 1

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Comment: After running samtools, the featureCounts command crashed. by eja.gssssse.r.m • 0

The buffer overflow detected error in your featureCount step usually indicates that the program is trying to write more data into memory …

Comment: gene Set with high AUC score but no cells assigned to cell type by eja.gssssse.r.m • 0

It sounds like your AUCell results may be showing high AUC scores without cell assignment due to thresholding or scoring cutoffs. Think of …

Answer: "Watched Tags" are being erased rather than updated by shepherl 4.2k

This should now be resolved

Answer: Question about collapsing ASVs by genus level during DESeq2 analysis by Michael Love 43k

I'll just note that microbiome stats folks tend to use other tools than DESeq2. > several ASVs belong to the same genus but are not iden…

Comment: Integration: Paired-end vs healthy single-end from a different source by igkryycpinmshzugby • 0

Yes, Option 1 (technical homogenization) reprocessing paired-end samples as single-end using only R1 is the most defensible approach when l…

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Bioconductor 3.22 Released!

Comment: "Watched Tags" are being erased rather than updated

Comment: deseq2 filter the low counts

Answer: DESeq2 interactions

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Popular Question to Fred Hutch (Recruiting) ▴ 40