Showing : DNAStringSet • reset
2
votes
1
reply
994
views
DNAStringSet to DNAStringSetList according to pattern in sequence names
dnastringset dnastringsetlist seqnames
6.4 years ago s.ghignone ▴ 10
3
votes
4
replies
4.2k
views
How to convert a DnaStringSet object to list of seq?
dnastringset list stringset
updated 7.7 years ago by 25k • written 7.7 years ago by ▴ 50
2
votes
5
replies
5.1k
views
How to use subSeq with DNAStringSet and information of GroupedIRanges?
subseq Xvector dnastringset
updated 7.8 years ago by 16k • written 7.8 years ago by • 0
0
votes
2
replies
1.1k
views
how to deal with multiple barcodes/index in the analysis
dnastringset aastringset
8.0 years ago XIA.PAN ▴ 20
6
votes
6
replies
6.6k
views
how to extract part of the DNA sequences from a DNAstringset
DNAstringset
updated 8.0 years ago by 16k • written 8.1 years ago by ▴ 20
3
votes
1
reply
5.9k
views
extract subsequence(s) from DNAStringSet with getSeq
dnastringset getseq
updated 8.7 years ago by 16k • written 8.7 years ago by ▴ 80
2
votes
3
replies
2.1k
views
visualing pwm motif on a DNAstring
pwmenrich dnastringset
updated 9.0 years ago by ▴ 50 • written 9.0 years ago by ▴ 20
0
votes
4
replies
1.7k
views
Using iterators and foreach with doMC, using DNAStringSets
dnastringset parallel iterators
9.2 years ago ben.ward ▴ 30
0
votes
3
replies
1.3k
views
I want to sample (random ) nucleic acids at middle 20 positions of DNAstring set
DNAStringSet sample
updated 9.3 years ago by 16k • written 9.3 years ago by ▴ 50
15
votes
2
replies
19k
views
Extract sequence from DNAStringSet object
dnastringset
updated 9.3 years ago by 25k • written 9.3 years ago by ▴ 120
3
votes
8
replies
2.1k
views
problem with @ranges@start in DNAStringSet
vcf testthat dnastringset
9.4 years ago TimothéeFlutre ▴ 80
1
vote
5
replies
4.8k
views
Converting a DNAStringSetList to characters quickly
readVcf DNAStringSet DNAStringSetList variantannotation readvcf
9.9 years ago dan.gatti • 0
12 results • Page 1 of 1
Recent ...
Replies
Comment: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf by AB ▴ 110
Force=TRUE did the trick. Thank you.
Comment: www.stats.ox.ac.uk seems to be off, leading to errors/delays when installing pac by DENG • 0
[https://github.com/djunsheep/CRANextra/blob/main/README.md][1] add the following to the `.Rprofile` and `Rprofile.site` # fixing the…
Comment: Transcript ID Mismatch in riboWaltz Annotation Table by shepherl 4.1k
riboWalze is not a Bioconductor package and does not appear to be a Bioconductor function; the maintainer is not guaranteed to be on this …
Answer: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf by shepherl 4.1k
What is your `sessionInfo()`? I just tried locally and it works fine so there might have been a bad or interrupted download when initially…
Comment: error in ChAMP loading file by shocked.tick.zyet • 0
Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…
Votes
Answer: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf
Answer: Differential expression of proteins using somascan data
Answer: Surprising behavior for DEXseq dispersion estimate plot?
Answer: Handle zero effective gene length when tximport RSEM results
Handle zero effective gene length when tximport RSEM results
Awards • All
Popular Question to James W. MacDonald 68k
Popular Question to Gordon Smyth 52k
Popular Question to AB ▴ 110
Popular Question to Lluís Revilla Sancho ▴ 760
Popular Question to tifaGis • 0
Locations • All
Italy, just now
Switzerland, 6 minutes ago
United States, 10 minutes ago
France, 16 minutes ago
UPF, Barcelona, Spain, 34 minutes ago
Traffic: 1080 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6