Bioconductor EPIC microarray

Showing : EPIC microarray • reset

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champ epic microarray normalization minfi

7.5 years ago Laura • 0

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minfi epic microarray bioconductor

updated 3.4 years ago by Lucy • 0 • written 7.7 years ago by c.sae-lee2 • 0

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bioconductor methylation epic microarray champ

7.9 years ago csappleby-mallinder1 • 0

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methylation epic microarray minfi methylationepic

8.7 years ago nhejazi • 0

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shinymethyl minfi epic microarray methylationepic qualitycontrol

8.8 years ago chelsey.ju • 0

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rnbeads methylation illumina epic microarray

9.3 years ago rasii • 0

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minfi dmpfinder dmp illuminahumanmethylationepicanno.ilmn10b.hg19 epic microarray

updated 9.4 years ago by James W. MacDonald 68k • written 9.4 years ago by Biologist ▴ 120

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minfi methylation EPIC microarray illumina

updated 9.6 years ago by Kasper Daniel Hansen ★ 6.5k • written 9.6 years ago by rasii • 0

8 results • Page 1 of 1

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Comment: upstream git branches of bioc-release by TrentonCollier99 • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments. https://bioc-release.r-univ…

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0

Thank you very much! will take that into consideration

Comment: Large logFC but somewhat high FDR by JKim • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.

Comment: upstream git branches of bioc-release by Jeroen ▴ 10

OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.

Comment: Large logFC but somewhat high FDR by Gordon Smyth 53k

I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```

Votes

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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Scholar to Gordon Smyth 53k