Showing : EPICv2manifest • reset
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Filtering out non-variable probes from EPICv2 matrix
DMRcate EPICv2manifest
updated 7 months ago by 68k • written 7 months ago by • 0
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2
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1.4k
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CpGs with genomic positions greater than the chromosome size in EPICv2?
EPICv2 EPICv2manifest
9 months ago Joshua Llano • 0
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2
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693
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Conumee2 - CNV.summaryplot()
conumee CopyNumberVariation MethylationAnalysis methylationArrayAnalysis EPICv2manifest
updated 9 months ago by 68k • written 9 months ago by • 0
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362
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Methylation data - different probes are classified differently based on transcript? (Illumina methylation arrays, using minfi)
minf minfiDataEPIC MethylationArrayData MethylationArray EPICv2manifest
10 months ago charlie.wright • 0
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2
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681
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MissMethyl failed to use gometh function for EPICv2
missMethyl EPICv2manifest
updated 11 months ago by 68k • written 11 months ago by • 0
1
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2
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573
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Epic v2 Annotation CpG_maf source?
MethylationArray methy EPICv2manifest
13 months ago Meghan • 0
2
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2
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811
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preprocessIllumina error with EPICv2 array
minfi EPICv2manifest
13 months ago Rakesh • 0
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0
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524
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EPIC v2 annotation and BigWig
EPICv2manifest IlluminaHumanMethylationEPICv2anno.20a1.hg38
17 months ago MajaVu • 0
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0
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742
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Problem with MethylAid ("Cannot get Manifest object for an 'Unknown' array") and Epicv2
minfi EPICv2manifest MethylAid
18 months ago pcibin • 0
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4
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2.5k
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SeSAMe DMR for EPIC V2
sesame EPICv2manifest epicv2
updated 5 months ago by • 0 • written 18 months ago by ▴ 50
1
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3
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3.0k
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CombineArrays for EPIC and EPIC V2
EPICV1 Methylation combineArrays minifi EPICv2manifest
updated 14 months ago by • 0 • written 20 months ago by • 0
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6
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1.8k
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unable to access Annotationhub latest record
DNAMethylation AnnotationHub EPICv2manifest annotation
updated 20 months ago by ▴ 230 • written 21 months ago by • 0
12 results • Page 1 of 1
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Comment: nice 3D displays for PCA analysis by adam80haynes • 0
That's a fascinating application of 3D printing in a scientific context. Using this technology to create custom lab equipment, models of mo…
Comment: Bioinformatician at the Lausanne University Hospital by TikTsokaasocissalpc • 0
The Random Word Generator in Italian is a useful tool for generating ideas and exploring new approaches, much like the innovative research …
Comment: DECIPHER DesignProbes unable to design FISH-probes by TikTsokaasocissalpc • 0
If you want to share your research progress and microbiome discoveries with colleagues or friends, [snaptroid android][1] download free mak…
Answer: Limma-voom sample weights and impact on DEG numbers by Gordon Smyth 53k
I recommend that you always use voomLmFit() instead of the earlier voom() or voomWithQualityWeights() functions. Personally, I would use sa…
Answer: wgcna module preseravtion taking too long? by ATpoint ★ 5.0k
WGCNA is not a Bioconductor package, you won't get an answer here. Consider biostars.org or the r/bioinformatics reddit. Note that 10 sampl…
Votes
Limma-voom sample weights and impact on DEG numbers
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
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