Bioconductor EnrichGO

Showing : EnrichGO • reset

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clusterProfiler enrichGO

updated 8 months ago by Michael Love 42k • written 9 months ago by cinzia.spagnoli • 0

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EnrichGO clusterProfiler

written 3.8 years ago by Carolina • 0

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980

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RNASeq simplify clusterProfiler enrichGO simplifyEnrichment

2.2 years ago estafana.t98 • 0

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clusterProfiler enrichGO

2.3 years ago Shakiba • 0

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clusterProfiler enrichGO clusterPro

3.0 years ago slimyMS • 0

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clusterProfiler enrichGO

3.0 years ago samsiljee • 0

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enrichGO

3.5 years ago dailing57 • 0

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R TAIR clusterProfiler enrichGO Arabidopsis

updated 3.5 years ago by Guido Hooiveld ★ 4.1k • written 3.5 years ago by abby-s • 0

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clusterProfiler enrichGO

updated 4.5 years ago by James W. MacDonald 67k • written 4.5 years ago by kavator ▴ 30

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software error enrichGO annotationHub clusterProfiler Job

updated 4.5 years ago by James W. MacDonald 67k • written 4.5 years ago by bnajafpour • 0

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ClusterProfiler enrichGO

updated 4.8 years ago by James W. MacDonald 67k • written 4.8 years ago by Reb • 0

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enrichGO clusterprofiler

6.2 years ago MAP ▴ 10

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7.8k

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clusterprofiler enrichGO barplot dotplot

6.3 years ago MAP ▴ 10

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clusterProfiler enrichGO

7.1 years ago Francois Marchildon ▴ 20

14 results • Page 1 of 1

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Comment: Differential Expression Analysis with unbalanced batches without replication bet by Thili • 0

Thank you for your reply. I currently have batch-corrected data processed with scvi-tools (specifically, totalvi) and have followed the sam…

Comment: Problem at champ.load by andrew.gibbons • 0

I'd love to know if anyone has a workaround too. I've tried rolling back ChAMP and R to the previous versions that others have said work wi…

Comment: ESTMATE, MCPcounter, EPIC, xCell input by Kang • 0

These are not, as far as I know, bioconductor packages. You should query on the websites for those specific software programs. @[mapquest][…

Comment: Robust way of dealing with low number of samples for Differential Gene Expressio by Kang • 0

I believe that pseudo-bulking is a strong way to approach DE, as long as it is possible to reliably identify the cell type across data and …

Comment: GOstats kegg analysis in wheat - help - none of the objects in the first column by GV Yoshikawa • 0

Thank you for the reply. I tried swapping columns before asking, it made no difference. head(keggframeData) path_id kegg…

Votes

A: Up/Down Regulated GeneList from edgeR and R

A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis

Answer: Combining RNAseq and microarray data using edgeR/limma-voom

Answer: How do I merge a list of GRanges?

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Teacher to Gordon Smyth 51k

Popular Question to Guido Hooiveld ★ 4.1k