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FCS
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3
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Modifying or writing a FCS file in R using the FlowCore package
FCS
flowframe
flowcore
flow cytometry
5.7 years ago
vonskopnik
▴ 10
3
votes
3
replies
2.5k
views
flowcore: z-Score normalization of flowSet (fsApply or normalize)
flowcore
fcs
normalization
flowstats
updated 8.8 years ago by
Jiang, Mike
★ 1.3k • written 8.8 years ago by
BenAbflack
• 0
1
vote
1
reply
2.0k
views
Loading FCS files
FCS
flow cytometry
bioconductor
phenoData
Loading Data
updated 7.3 years ago by
SamGG
▴ 350 • written 7.3 years ago by
smajor
• 0
3
votes
1
reply
2.0k
views
Convert Flowframe to matrix
flowcore
fcs
flow cytommetry
matrix
conversion
updated 4.9 years ago by
Jake Wagner
▴ 310 • written 4.9 years ago by
apurva
• 0
0
votes
3
replies
1.3k
views
Loop for mass analyses and extraction of FCS data
Exprs
Lapply
FCS
for loop
flowcore
updated 6.5 years ago by
Jiang, Mike
★ 1.3k • written 6.5 years ago by
Wilson Yeo
• 0
0
votes
0
replies
1.1k
views
How to load additional data from fcs files
fcs
concentration
experimentdata
7.0 years ago
jurg.spaak
• 0
0
votes
0
replies
1.1k
views
Trimming FCS files doesn't decrease size
FCS
8.7 years ago
Nick England
• 0
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Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu
by
James W. MacDonald
65k
I doubt you have that many contrasts. I think that is probably the number of rows. What does `dim(fit)` return (and `head(fit$coef)`)?
Answer: Extremely small p-values using Limma for proteomic data
by
James W. MacDonald
65k
If you fit a cell means model (without an intercept), you will have to construct contrasts using `makeContrasts` and fit them using `contra…
Comment: Memory errors using read.bismark?
by
Juan Higareda
• 0
Thanks a lot Peter, We solved the problem, IT had implemented a policy of RAM usage that started a conflict with any RAM-hungry process, m…
Answer: meffil.snp.concordance
by
James W. MacDonald
65k
This support site is meant to help people with technical questions about Bioconductor packages. The `meffil` package is not Bioconductor, n…
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James W. MacDonald
65k
Zuguang Gu submitted both of those packages as part of the current release, and I submitted a PR for `minfi` so it will now distinguish the…
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Answer: How to save the DEXSeq results
Answer: minfi support of illumina Infinium methylationEPIC v2.0
Comment: minfi support of illumina Infinium methylationEPIC v2.0
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Help with running egsea()
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