Bioconductor FeatureCounts

Showing : FeatureCounts • reset

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239

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featureCounts Rsubread

27 days ago • updated 8 days ago isaac.vock • 0

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134

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FeatureCounts Rsubread

7 weeks ago chris2.a.white • 0

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251

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featureCounts Rsubread

updated 7 weeks ago by Wei Shi ★ 3.6k • written 11 weeks ago by Alex • 0

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419

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featureCounts Rsubread

updated 12 weeks ago by Gordon Smyth 50k • written 12 weeks ago by tjgray4 • 0

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741

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featurecounts Rsubread

3 months ago • updated 12 weeks ago isaac.vock • 0

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934

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rpkm edgeR featureCounts

8 months ago • updated 7 months ago Gordon Smyth 50k

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1.0k

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RNASeqData Rsubread mapping featurecounts

updated 8 months ago by James W. MacDonald 65k • written 8 months ago by vitoriastavis • 0

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653

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Rsubread featureCounts

updated 9 months ago by Yang Liao ▴ 380 • written 9 months ago by StevenE.Strong • 0

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855

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Bioconductor Rsubread featureCounts

updated 11 months ago by Wei Shi ★ 3.6k • written 12 months ago by Carlos • 0

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4.7k

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subread featureCounts

updated 9 months ago by Yang Liao ▴ 380 • written 2.8 years ago by s.muroy ▴ 10

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3.5k

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RNA-seq featureCounts ht-seq

written 3.8 years ago by ag1805x ▴ 80

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2.3k

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featurecounts SAM htseqcounts

updated 9 months ago by Yang Liao ▴ 380 • written 7.0 years ago by courtney.stairs • 0

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1.6k

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rsubread featurecounts summarizeoverlaps

updated 27 days ago by isaac.vock • 0 • written 7.9 years ago by Jon Manning ▴ 90

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18k

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featurecounts rsubread

updated 10 months ago by Robert • 0 • written 9.0 years ago by samuel collombet ▴ 140

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6.1k

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rsubread featurecounts

updated 12 weeks ago by Gordon Smyth 50k • written 9.1 years ago by Ryan C. Thompson ★ 7.9k

15 results • Page 1 of 1

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Comment: Why p value inconsistent when using different number of pathway score? by Chris • 0

Hi Robert, if two conditions don't have hundreds of differential express genes ( in some conditions such as peripheral blood Alzheimer vs n…

Answer: Dominance Index for Shotgun Metagenomics Data by Leo Lahti ▴ 40

1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …

Answer: PCA plot suggestions by Michael Love 41k

For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10

Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…

Votes

Answer: Dominance Index for Shotgun Metagenomics Data

Answer: Math expression in shapeCustom legend in EnhancedVolcano

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length

Comment: Deseq2. decontXcounts not integers. Useful alternative?

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

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