updated 14 hours ago by
Guido Hooiveld
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written 14 hours ago by
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updated 9 weeks ago by
Guido Hooiveld
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written 9 weeks ago by
enee
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updated 7 months ago by
ATpoint
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written 7 months ago by
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written 10 months ago by
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updated 19 days ago by
Chris
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written 7.4 years ago by
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Comment: Why is longestConsecutive() depreceated in version 2.72 (BioC version 3.19)?
by
ATpoint
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4.2k
I don't have an answer to the "why" but maybe a simple reimplemention will do:
```r
seqs <- c("ATCATCGTATCAAAGTC", "AAAACGTATCAAAGTC", "TG…
Comment: How to add Ensembl ids after Pseudobulk analysis by DESeq2
by
Guido Hooiveld
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After checking `?DESeqDataSetFromMatrix` note this information:
arguments provided to SummarizedExperiment including rowRanges and met…
Answer: Error in gseDO function
by
Guido Hooiveld
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4.0k
Yes, you are missing something. :-)
For a GSEA you will need to use as input all genes that you are analyzing; these genes should be ran…
Comment: GSVA function
by
Robert Castelo
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3.3k
No, negative values may occur after log transformation when the `log(x)` is taken from a positive number `x with 0 < x < 1`, and therefore …
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