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Lipidomics
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1.5k
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Normalization of metabolomics/lipidomics data for limma
Lipidomics
Metabolomics
limma
Normalization
2.8 years ago
pgugger
▴ 70
0
votes
0
replies
497
views
when to use filter_by_cv() function from the lipidr package
Lipidomics
lipidr
lipi
3.4 years ago
eme
• 0
1
vote
0
replies
781
views
Job:
Metabolomics Bioinformatics Postdoc Position at Steno Diabetes Center Copenhagen
metabolomics
lipidomics
clinical research
data integration
biostatistics
Job
4.2 years ago
Tommi Suvitaival
▴ 10
0
votes
0
replies
1.2k
views
Shotgun lipidomics analysis
shotgun lipidomics
lipidomics
mass spectrometry
8.3 years ago
Titan
• 0
1
vote
3
replies
2.5k
views
XCMS2 on MSMS data
xcms
metabolomics
massspectrometry
lipidomics
bioconductor
8.3 years ago
Titan
• 0
0
votes
3
replies
2.1k
views
Problem with XCMS
xcms
metabolomics
lipidomics
proteomics
massspectrometry
8.3 years ago
Titan
• 0
0
votes
4
replies
2.8k
views
XCMS for targeted metabolomic/lipidomics/proteomics
xcms
metabolomics
lipidomics
statistics
8.3 years ago
Titan
• 0
0
votes
0
replies
1.4k
views
Bioinformatics position available in lipidomics biomarker research
Lipidomics
Lipidomics
14.5 years ago
Michael Eiden
▴ 10
8 results • Page
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Comment: Store output of matchPWM()
by
mat149
▴ 70
out <- do.call(c, lapply(hitlist, function(x) as(x, "IRanges"))) Error in do.call(c, lapply(hitlist, function(x) as(x, "IRanges"))) : '…
Answer: Store output of matchPWM()
by
James W. MacDonald
65k
Something like this? ``` ind <- as.logical(sapply(hitlist, length)) out <- do.call(c, lapply(hitlist, function(x) as(x, "IRanges"))) …
Answer: log2FoldChange value is way too different when compared with counts(dds)
by
Michael Love
41k
This has been asked before, but with a multi factor design, the LFC for coefficient X adjust for the others, in a way that is often hard to…
Answer: Get genomic coordinates of CpGs sites (chromosomes, genomic position)
by
James W. MacDonald
65k
You don't say what array that is, so I will guess. ``` > library(IlluminaHumanMethylationEPICanno.ilm10b4.hg19) > Locations DataFrame…
Answer: SGSeq: moving toward diffex from SGSeq analysis
by
Leonard Goldstein
▴ 200
`vid` and `eid` are unique identifiers for splice variants and splicing events respectively. They are analogous to exon bin and gene identi…
Votes
SPIA plotP giving error
Answer: Fold change calculation in Diffbind vs. DESEQ2?
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
C: Extremely big genes in annotation TxDb packages
Make custom Txdb class objects from Txdb
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Ian D.
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junhui.li11
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