Showing : massspectrometry • reset
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Analyse of MASS spectrometry proteomics data
DifferentialExpression MassSpectrometry
updated 13 months ago by • 0 • written 19 months ago by • 0
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637
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Job: Open position in the CBIO lab: single-cell proteomics
Proteomics SingleCell JobPosting MassSpectrometry
13 months ago Laurent Gatto 1.6k
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621
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Job: Open position in the CBIO lab: spatial proteomics and PTMs
pRoloc proteomics Spatial Proteomics MassSpectrometry
14 months ago Laurent Gatto 1.6k
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502
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News: Course - R/BIOCONDUCTOR FOR MASS SPECTROMETRY AND PROTEOMICS
Proteomics R Bioconductor MassSpectrometry
14 months ago info ▴ 10
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4
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1.2k
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How to analyse RNA-based protein pulldown mass spectrometry data
Proteomics limma MassSpectrometry
updated 12 months ago by 50k • written 2.8 years ago by • 0
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2
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1.2k
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calculate theoretical isotope distribution give the AA sequence
Metabolomics proteomics MassSpectrometry
3.4 years ago Oliver • 0
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3
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1.1k
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Why I can not install rTANDEM?
MassSpectrometry Proteomics mzR
3.4 years ago Gilad • 0
2
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2
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3.7k
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Thermo Xcalibur RAW data to MGF
mass spectrometry massspectrometry
updated 5.9 years ago by 1.6k • written 5.9 years ago by ▴ 10
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1
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1.5k
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Metabolite identification package
xcms massspectrometry metabolomics
updated 6.0 years ago by ★ 2.0k • written 6.0 years ago by • 0
0
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4
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1.6k
views
Cannot install and load MSstats package
proteomics massspectrometry msstats
updated 6.1 years ago by 1.6k • written 6.1 years ago by • 0
2
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3
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2.1k
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Imputation method selection (mass spectrometry) bimodal distribution
impute missing value imputation DEP massspectrometry
updated 6.4 years ago by 1.6k • written 6.4 years ago by ▴ 60
1
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3
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2.5k
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XCMS2 on MSMS data
xcms metabolomics massspectrometry lipidomics bioconductor
8.3 years ago Titan • 0
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3
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2.1k
views
Problem with XCMS
xcms metabolomics lipidomics proteomics massspectrometry
8.3 years ago Titan • 0
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0
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1.5k
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News: 4 days left to register for a short course on computational proteomics
proteomics news course massspectrometry News
9.1 years ago Olga Vitek ▴ 40
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1.3k
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Job: Research Data Technician, Cambridge, UK
proteomics massspectrometry Job
9.2 years ago Laurent Gatto 1.6k
25
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9
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6.8k
views
voom for spectral counts
limma voom proteomics spectral counts massspectrometry
updated 9.2 years ago by 50k • written 9.2 years ago by ▴ 40
2
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1
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1.7k
views
News: Announcing a short course in computational and statistical proteomics
proteomics massspectrometry R News
9.3 years ago vitek.olga ▴ 20
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1
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1.4k
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A package to analyse Quantitative proteomics study
massspectrometry
updated 9.5 years ago by 1.6k • written 9.5 years ago by ▴ 130
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2
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2.3k
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Problem with openMSfile in mzR
massspectrometry
9.5 years ago meilan23 • 0
0
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1
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1.7k
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Mass Spectrometry data analysis
MassSpectrometry PRIDE
updated 9.5 years ago by 1.6k • written 9.5 years ago by • 0
20 results • Page 1 of 1
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Answer: Dominance Index for Shotgun Metagenomics Data by Leo Lahti ▴ 40
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions by Michael Love 41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Votes
Answer: Dominance Index for Shotgun Metagenomics Data
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
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