Showing : Parameters • reset
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Found gaps in scan time of file : cut scantime-vector at NA seconds. Error: BiocParallel errors element index: 1, 2, 3, 4, 5, 6 first error: argu…
xcms adjustRtime parameters scantime error biocparallel error
6.2 years ago abrsoule ▴ 30
0
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1.7k
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How can I compute AIC for MAST hurdle model fitted in the whole dataset?
MAST AIC calcuation Parameters single cell hurdle model
updated 21 months ago by ▴ 30 • written 6.9 years ago by • 0
0
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1
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1.6k
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rtracklayer::liftOver parameters (minMatch)
rtracklayer liftOver parameters minMatch
updated 7.7 years ago by ★ 11k • written 7.7 years ago by ▴ 10
0
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4
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1.9k
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Volcano Plot after using Treat Function
Volcano plot Parameters
updated 8.2 years ago by 53k • written 8.2 years ago by • 0
0
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1
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1.4k
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More control parameters expected in lpsymphony?
lpsymphony R parameters control warm start
updated 9.5 years ago by ★ 13k • written 9.5 years ago by • 0
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Comment: Bioinformatician at the Lausanne University Hospital by eja.ger.m • 0
For individuals looking to improve communication and collaboration in demanding medical or research environments like the Genetic Medicine …
Answer: NUPOP usage by shepherl 4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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