Showing : Parameters • reset
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Found gaps in scan time of file : cut scantime-vector at NA seconds. Error: BiocParallel errors element index: 1, 2, 3, 4, 5, 6 first error: argu…
xcms adjustRtime parameters scantime error biocparallel error
5.2 years ago abrsoule ▴ 30
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How can I compute AIC for MAST hurdle model fitted in the whole dataset?
MAST AIC calcuation Parameters single cell hurdle model
updated 7 months ago by ▴ 30 • written 5.8 years ago by • 0
0
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1.4k
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rtracklayer::liftOver parameters (minMatch)
rtracklayer liftOver parameters minMatch
updated 6.6 years ago by ★ 11k • written 6.6 years ago by ▴ 10
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4
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1.5k
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Volcano Plot after using Treat Function
Volcano plot Parameters
updated 7.1 years ago by 51k • written 7.1 years ago by • 0
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1.2k
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More control parameters expected in lpsymphony?
lpsymphony R parameters control warm start
updated 8.4 years ago by ★ 13k • written 8.4 years ago by • 0
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Comment: Volcano plot has many values around zero by Michael Love 42k
It's positive over zero or nearly so.
Answer: Volcano plot has many values around zero by swbarnes2 ★ 1.4k
You've got genes with supposedly have a 32-fold difference, and the adjusted p-values are < 1x10-10? That seems odd.
Comment: Volcano plot has many values around zero by mjun • 0
Why this cluster close to 0 with low p value is so distinctive. Is this common? What does it mean and why? Thanks
Comment: Volcano plot has many values around zero by swbarnes2 ★ 1.4k
I don't think this is evidence that the dataset is invalid. It's evidence that your experiment is underpowered, and/or your experimental c…
Comment: Differential Expression Analysis with unbalanced batches without replication bet by Gordon Smyth 51k
Have you read the totalVI documentation?, which says: > **Important** > We do not recommend using totalVI denoised values in other differ…
Votes
Comment: Weird looking volcano plot
Volcano plot has many values around zero
A: Up/Down Regulated GeneList from edgeR and R
A: Up/Down Regulated GeneList from edgeR and R
A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis
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