Bioconductor LiftOver

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liftOver SNP GWASTools

2.9 years ago bonheur • 0

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3.4k

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lifto liftOver

updated 3.8 years ago by Marcel Ramos 700 • written 3.8 years ago by james.dalgleish • 0

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2.9k

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liftOver rtracklayer

updated 5.0 years ago by James W. MacDonald 68k • written 5.1 years ago by Mikhail Dozmorov ▴ 30

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liftOver

updated 5.2 years ago by shepherl 4.3k • written 5.3 years ago by bluepebbles • 0

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liftOver

5.3 years ago geneprophet • 0

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1.9k

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hg19 liftover matrixeqtl DMRcate

updated 6.8 years ago by James W. MacDonald 68k • written 6.8 years ago by yoursbassanio ▴ 10

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rtracklayer export.bw liftover

updated 7.3 years ago by Michael Lawrence ★ 11k • written 7.3 years ago by ang ▴ 20

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1.8k

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rtracklayer liftOver parameters minMatch

updated 7.9 years ago by Michael Lawrence ★ 11k • written 7.9 years ago by Nik dAK ▴ 10

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rtracklayer liftover bioconductor R

updated 8.5 years ago by Michael Lawrence ★ 11k • written 8.5 years ago by m.guelfi • 0

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liftover rtracklayer

updated 8.6 years ago by Michael Lawrence ★ 11k • written 8.6 years ago by beausoleilmo • 0

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software error liftOver workflowinstall package installation

updated 9.4 years ago by James W. MacDonald 68k • written 9.4 years ago by JustGettinStarted • 0

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Comment: Can sample-level weights be used when analysing GSVA scores in limma? by A.Barden ▴ 20

Thanks both for this useful information.

Comment: Reproducibility of code in various Bioconductor versions by Gordon Smyth 53k

SNPlocs.Hsapiens.dbSNP155.GRCh38 is available for download from the same location as always. It has not changed since Bioc 3.20: Presumabl…

Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack by a2a2hd42aa • 0

Similarly, for structural complexity in the [He777 Game][1] APK, having precise control over every detail is what makes a high-performance …

Answer: Issue loading and downloading Bioconductor 3.22 packages after update by strawberry3 • 0

Hi, thank you all for the advice. Using James's advice, I managed to install SNPlocs.Hsapiens.dbSNP155.GRCh38, but it took almost half an …

Answer: Issue loading and downloading Bioconductor 3.22 packages after update by James W. MacDonald 68k

As Robert and ATpoint have mentioned, you need to allow more time to download a large file like this. ``` > options(timeout = 5e5) > l…

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Answer: Can sample-level weights be used when analysing GSVA scores in limma?

Comment: Can sample-level weights be used when analysing GSVA scores in limma?

Answer: Issue loading and downloading Bioconductor 3.22 packages after update

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