Bioconductor LiftOver

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212

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liftOver SNP GWASTools

6 months ago bonheur • 0

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949

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lifto liftOver

updated 16 months ago by Marcel Ramos 680 • written 16 months ago by james.dalgleish • 0

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1.2k

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liftOver rtracklayer

updated 2.6 years ago by James W. MacDonald 63k • written 2.6 years ago by Mikhail Dozmorov ▴ 30

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962

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liftOver

updated 2.8 years ago by shepherl 3.5k • written 2.8 years ago by bluepebbles • 0

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605

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liftOver

2.9 years ago geneprophet • 0

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995

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hg19 liftover matrixeqtl DMRcate

updated 4.3 years ago by James W. MacDonald 63k • written 4.3 years ago by yoursbassanio ▴ 10

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1.0k

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rtracklayer export.bw liftover

updated 4.8 years ago by Michael Lawrence 11k • written 4.8 years ago by ang ▴ 20

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937

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rtracklayer liftOver parameters minMatch

updated 5.5 years ago by Michael Lawrence 11k • written 5.5 years ago by Nik dAK ▴ 10

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2.4k

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rtracklayer liftover bioconductor R

updated 6.1 years ago by Michael Lawrence 11k • written 6.1 years ago by m.guelfi • 0

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1.5k

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liftover rtracklayer

updated 6.1 years ago by Michael Lawrence 11k • written 6.1 years ago by beausoleilmo • 0

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1.8k

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software error liftOver workflowinstall package installation

updated 7.0 years ago by James W. MacDonald 63k • written 7.0 years ago by JustGettinStarted • 0

11 results • Page 1 of 1

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Comment: DMRcate design by Jitendra ▴ 10

Thanks James, do I also need to mention 'contrasts=FALSE' in cpg.annotate. Thanks a lot for your all help and time.

Comment: Speeding up of DelayedArray::write_block() by Koki ▴ 10

I don't know the details but do you mean using `HDF5RealizationSink` or `TENxRealizationSink` will make it possible to writing sparse multi…

Comment: DelayedArray::read_sparse_block by Koki ▴ 10

Ok, I understood. How about "writing" to HDF5? Are you going to implement `write_block_as_sparse` in `SparseArray` package?

Comment: DelayedArray::read_sparse_block by Hervé Pagès 16k

> So do you means the specification change from DelayedArray's read_sparse_block to SparseArray's read_block_as_sparse will accelerate the …

Comment: DelayedArray::read_sparse_block by Koki ▴ 10

Thanks for your reply. So do you means the specification change from `DelayedArray`'s `read_sparse_block` to `SparseArray`'s `read_block_a…

Votes

Answer: DMRcate design

Comment: DMRcate design

Answer: What MetaPhlAn3 database was used in cMD 3?

Comment: Speeding up of DelayedArray::write_block()

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