Bioconductor Repitools

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repitools promoter tss annotation

7.8 years ago Ryan C. Thompson ★ 7.9k

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repitools bioconductor cpgDensityCalc

8.8 years ago divyswar01 • 0

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Baymeth methylation MBD-seq Repitools

9.6 years ago pm2015 • 0

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repitools

10.5 years ago Matthias Lienhard ▴ 280

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BSgenome BSgenome Repitools BSgenome BSgenome Repitools

11.9 years ago Dario Strbenac ★ 1.6k

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BSgenome BSgenome Repitools BSgenome BSgenome Repitools

11.9 years ago Jaritz,Markus ▴ 20

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GO Repitools GO Repitools

updated 12.2 years ago by Dario Strbenac ★ 1.6k • written 12.2 years ago by Tim Smith ★ 1.1k

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limma Repitools limma Repitools

12.9 years ago Guest User ★ 13k

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Alignment convert Repitools Alignment convert Repitools

updated 2.1 years ago by Marge • 0 • written 13.0 years ago by José Luis Lavín ▴ 280

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BSgenome BSgenome Repitools BSgenome BSgenome Repitools

updated 14.2 years ago by Chao-Jen Wong ▴ 580 • written 14.2 years ago by Guest User ★ 13k

10 results • Page 1 of 1

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Comment: Pairwise comparison of multiple groups with different base by ja569116 • 0

Hi @mikelove I have a similar situation, and I feel that I have interpreted the results in the wrong way. In my case I would like to identi…

Comment: Are individual-mouse-based statistics possible in CellChat? by TikTsossakaas33ocissalpc • 0

Questions about comparing groups and statistical significance highlight how data driven thinking matters across fields. In online mobile ga…

Comment: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink by ja569116 • 0

Hi @atpoint Thanks for the information. Could you please expand on when to use adjusted p-values vs nominal p-values. My understanding was …

Answer: limpa analysis advice by Gordon Smyth 53k

It is actually very hard to estimate the DPC from observed data, because the curve is function of unobserved intensities rather than a func…

Answer: When to use edgeR or limma by Gordon Smyth 53k

The short answer is that we generally prefer edgeR for applications with lots of small counts and limma for complex designs with random eff…

Votes

Answer: When to use edgeR or limma

A: deseq2 - paired samples in 2 sequencing types with very different library sizes

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Popular Question to Lluís Revilla Sancho ▴ 760