Showing : Repitools • reset
0
votes
3
replies
2.8k
views
How to handle multi-TSS genes in Repitools?
repitools promoter tss annotation
7.8 years ago Ryan C. Thompson ★ 7.9k
1
vote
2
replies
1.8k
views
cpgDensityCalc function in Repitools giving contradictory tools
repitools bioconductor cpgDensityCalc
8.8 years ago divyswar01 • 0
0
votes
0
replies
1.2k
views
Analysis of MBD-seq data without ssl control using BayMeth
Baymeth methylation MBD-seq Repitools
9.6 years ago pm2015 • 0
0
votes
0
replies
1.2k
views
SssI free analysis in BayMeth/Repitools
repitools
10.5 years ago Matthias Lienhard ▴ 280
0
votes
0
replies
1.3k
views
Repitools - featureScores - mappability Bsgenome object
BSgenome BSgenome Repitools BSgenome BSgenome Repitools
11.9 years ago Dario Strbenac ★ 1.6k
0
votes
0
replies
1.6k
views
Repitools - featureScores - mappability Bsgenome object
BSgenome BSgenome Repitools BSgenome BSgenome Repitools
11.9 years ago Jaritz,Markus ▴ 20
0
votes
5
replies
2.7k
views
Graph of methylation data around TSS - Repitools or other package?
GO Repitools GO Repitools
updated 12.2 years ago by ★ 1.6k • written 12.2 years ago by ★ 1.1k
0
votes
0
replies
1.3k
views
Analysing grouped datasets in repitools
limma Repitools limma Repitools
12.9 years ago Guest User ★ 13k
0
votes
21
replies
8.5k
views
BAM files to Genomic Ranges object
Alignment convert Repitools Alignment convert Repitools
updated 2.1 years ago by • 0 • written 13.0 years ago by ▴ 280
0
votes
3
replies
2.2k
views
Repitools/ClusterPlots
BSgenome BSgenome Repitools BSgenome BSgenome Repitools
updated 14.2 years ago by ▴ 580 • written 14.2 years ago by ★ 13k
10 results • Page 1 of 1
Recent ...
Replies
Answer: Incosistencies in buildSNNGraph() function by stephengriffin04 • 0
Thank you for shedding light on the inconsistencies in the `buildSNNGraph()` function. It's crucial for users to address these issues as th…
Answer: A problem occurs when running the monocle2 by stephengriffin04 • 0
I totally feel you on the monocle2 issues! I had a similar run-in with unexpected errors last week that had me pulling my hair out. Did you…
Answer: limpa-blank normalization and Spectronaut's PTM stoichiometry by Gordon Smyth 53k
limpa reads standard feature-level output from Spectronaut. You do not need to make any changes to the output before reading it into limpa.…
Comment: Question about the filterByExpr function inputs in edgeR by mohammedtoufiq91 ▴ 10
@gordonsmyth Noted, thank you very much.
Comment: Question about the filterByExpr function inputs in edgeR by Gordon Smyth 53k
Regarding edgeR v4 filtering, I didn't mention anything about a minimum count of 10 but rather said "a positive count". So a minimalistic f…
Votes
Comment: Question about the filterByExpr function inputs in edgeR
Answer: Question about the filterByExpr function inputs in edgeR
Answer: Question about the filterByExpr function inputs in edgeR
A: DESeq2: What is the unit of DESeq2 normalized read count (VST)? Is it tag per mi
Answer: Clarification on counting in Rsubread (featureCounts)
Awards • All
Autobiographer to Frances Turner ▴ 20
Popular Question to maltethodberg ▴ 180
Popular Question to mohammedtoufiq91 ▴ 10
Popular Question to Lluís Revilla Sancho ▴ 760
Commentator to James W. MacDonald 68k
Locations • All
Switzerland, 2 minutes ago
Portugal, 33 minutes ago
South Korea, 1 hour ago
United Kingdom, 1 hour ago
WEHI, Melbourne, Australia, 1 hour ago
Traffic: 1506 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6