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Select
•
reset
3
votes
6
replies
1.6k
views
error using org.Hs.eg.db package : Error in get(load(file)) :
org.hs.eg.db
select
9.0 years ago
tina.khajeh
• 0
8
votes
4
replies
6.6k
views
Error UseMethod ("select_"): from bioconductor dplyr select package
bioconductor
dplyr
select
updated 6.5 years ago by
Martin Morgan
25k • written 6.5 years ago by
abedini.jaleh
▴ 10
0
votes
3
replies
1.2k
views
Select function not working in R; how to correct custom select
Select
Annotation Dbi
Custom
updated 4.5 years ago by
James W. MacDonald
65k • written 4.5 years ago by
ekl
• 0
1
vote
3
replies
1.1k
views
AnnotationDBI Select with incomplete keys tags
annotationdbi
select
8.1 years ago
Rockbar
• 0
0
votes
3
replies
1.5k
views
Select in UniProt.ws not working?
uniprot.ws
select
updated 7.7 years ago by
Martin Morgan
25k • written 7.7 years ago by
sarah.sandmann
• 0
1
vote
3
replies
1.4k
views
Very slow select to extract data from UniProt.ws object
uniprot.ws
select
updated 5.9 years ago by
Martin Morgan
25k • written 5.9 years ago by
alxcho
▴ 10
1
vote
2
replies
11k
views
select() gene in db not working although key exists
annotationdbi
org.mm.eg.db
org.dm.eg.db
select
9.1 years ago • updated 9.0 years ago
Patrick Schorderet
▴ 20
5
votes
2
replies
5.4k
views
org.Hs.eg.db - convert ALIAS to ENTREZID, GENENAME
org.hs.eg.db
select
8.6 years ago
Brian Smith
▴ 120
4
votes
2
replies
3.4k
views
select keys from org.Mm.eg.db
org.mm.eg.db
select
list
updated 8.6 years ago by
James W. MacDonald
65k • written 8.6 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
1
reply
1.0k
views
What is the name of this probe?
affymetrix microarrays
hta20transcriptcluster
r
select
updated 5.3 years ago by
James W. MacDonald
65k • written 5.3 years ago by
Pindre
• 0
10 results • Page
1 of 1
Recent ...
Replies
Answer: Once again a "Model matrix not full rank"
by
swbarnes2
★ 1.3k
Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
Gordon Smyth
50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
It is true that goseq isn't available for Bioc 3.19. That is because goseq depends on txbmaker, which is itself not yet available for Bioc…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
James W. MacDonald
65k
This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
Comment: CombineArrays for EPIC and EPIC V2
by
Kim
• 0
Thank you Tim, this is a great help in getting me started!
Votes
Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
A: Print Differentially Expressed Exons From Dexseq Results
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