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oligo source Install

19 months ago • updated 18 months ago Guido Hooiveld ★ 4.1k

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Source flowCore Repository git

updated 2.6 years ago by shepherl 4.2k • written 2.6 years ago by dominic.r • 0

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biocinstaller installation install source conda

updated 9.4 years ago by Martin Morgan 25k • written 9.4 years ago by jol.espinoz ▴ 40

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biocinstaller source

10.1 years ago michel.renou • 0

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security http source installation

updated 10.5 years ago by Dan Tenenbaum ★ 8.2k • written 10.5 years ago by will.townes • 0

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edgeR rpkm source code

updated 10.7 years ago by Martin Morgan 25k • written 10.7 years ago by thibault.lorin ▴ 10

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Comment: How does contrasts.fit do in limma to extract comparisons with a model having in by Gordon Smyth 53k

I refered you to the DiffVar package 11 months ago. Did you consider it? Your clarification makes it clear that your issue is not with lim…

Comment: How does contrasts.fit do in limma to extract comparisons with a model having in by jtsy6383 • 0

Thanks for the reply Gordon. I am also working on the project and have been tasked to reformulate and add some details. We're interested i…

Answer: How does contrasts.fit do in limma to extract comparisons with a model having in by Gordon Smyth 53k

The limma Users Guide explains how to test for interactions or to test for contrasts very easily. limma can work with any design matrix, bu…

Answer: NUPOP usage by shepherl 4.2k

You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…

Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0

In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …

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C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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