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reset
0
votes
2
replies
493
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R/Rstudio: using rtracklayer to import bigwig files from http works with MacOS but not with Windows
import.bw
rtracklayer
Windows
http
6 months ago
sla
• 0
1
vote
5
replies
1.0k
views
RStudio vs R: using rtracklayer to import bigwig files from http works in R but not in RStudio.
import.bw
rtracklayer
http
RStudio
updated 17 months ago by
Michael Lawrence
11k • written 18 months ago by
Søren
• 0
4
votes
2
replies
538
views
GenomicDataCommons request timeouts when cases() %>% ... %>% results_all()
genomicdatacommons
tcga
gdc
rest
http
updated 3.3 years ago by
Sean Davis
21k • written 3.3 years ago by
mk
▴ 20
0
votes
4
replies
1.1k
views
Gviz IdeogramTrack fails with Error: failed to load HTTP resource
gviz
gviz-package
rtracklayer
http
4.3 years ago
enricoferrero
▴ 610
3
votes
6
replies
1.7k
views
function getAE from ArrayExpress needs update because EBI has switched to https
arrayexpress
xml
rcurl
http
EBI
updated 4.6 years ago by
Wolfgang Huber
13k • written 4.6 years ago by
Bernd Klaus
▴ 600
2
votes
7
replies
1.1k
views
Bioconductor Installation may be insecure against man-in-the-middle attacks
security
http
source
installation
updated 7.0 years ago by
Dan Tenenbaum
★ 8.2k • written 7.0 years ago by
will.townes
• 0
6 results • Page
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Answer: RPX PXDataset error
by
Laurent Gatto
1.5k
- From the URL in the error, it looks like you have the latest (or a recent) `rpx` version. It is generally recommended to add the output o…
Answer: Package name already exists due to previous issue
by
shepherl
3.1k
This has been resolved. There needed to be a manual intervention by the core team to remove the old issue from the issue tracker database.…
Answer: Package name already exists due to previous issue
by
James W. MacDonald
59k
You should probably send this question to bioc-devel@r-project.org
Comment: edgeR - how to convert DGELRT and other classes to .csv files
by
Benjamin
• 0
Thank you Aaron. I am wondering if you know how to write the .csv file with both the topTags (statistical analysis) and the original counts…
Answer: error with: .make_splicings <- function(exons, cds, stop_codons=NULL)
by
James W. MacDonald
59k
That's a very old build, and an old version of the GFF standard. You would be better off getting something more recent. ``` > txdb <- m…
Votes
Comment: Merging two plated in R
Answer: Merging two plated in R
Answer: Merging two plated in R
A: Can we use glmQLFit instead of glmFit and then glmLRT in edgeR
A: Can we use glmQLFit instead of glmFit and then glmLRT in edgeR
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