Bioconductor Biotype

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4.8k

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ssgsea GSVA biotype proteincoding msigdb

updated 14 months ago by tifaGis • 0 • written 24 months ago by snijesh ▴ 200

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2.1k

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grch37 transcripts biotype biomaRt ncrna

updated 7.3 years ago by James W. MacDonald 68k • written 7.3 years ago by sergio.martinezcuesta ▴ 10

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2.4k

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DESeq2 PCA rlog transformation biotype

7.6 years ago JoannaF ▴ 10

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1.3k

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scater sce biotype R

updated 7.7 years ago by Aaron Lun ★ 29k • written 7.7 years ago by thebadpenny • 0

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1.8k

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biomart TF biotype ensembl mus musculus

updated 7.8 years ago by Mike Smith ★ 6.6k • written 7.8 years ago by rbronste ▴ 60

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Answer: How can I correctly use phyloseq with Docker? by Kevin Blighe ★ 4.0k

The Bioconductor version must be compatible with the R version. Bioconductor version 3.18 is compatible with R version 4.3. The Dockerfile …

Answer: Boolean Gate Combination for Any 2 Positive Events in flowWorkspace by Kevin Blighe ★ 4.0k

Your proposed code is correct and will achieve the desired outcome. The boolean filter expression `IFNg & TNFa | IFNg & IL2 | TNFa & IL2` i…

Answer: Install old version of DESeq2 by Kevin Blighe ★ 4.0k

The Dockerfile that you have provided is appropriate for installing DESeq2 and apeglm from Bioconductor release 3.10, which corresponds to …

Answer: Guidance Requested on GCN Network Analysis and Module Enrichment in R by Kevin Blighe ★ 4.0k

The discrepancy between `final_exp1` and `final_exp2` could arise from several factors, despite matching dimensions. The `identical()` func…

Answer: ORFik: spliced 5utr regions by Kevin Blighe ★ 4.0k

Hello Luna. The findUORFs function in ORFik identifies upstream open reading frames by extracting and concatenating the sequences of exo…

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Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Post translational modifications and phosphoproteomics in limpa?

Answer: Identifying differentially expressed genes in individual samples from a large co

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Scholar to Gordon Smyth 53k