Bioconductor Bsgenome.hsapiens.ucsc.hg38

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BSgenome BSgenome.Hsapiens.UCSC.hg38 Offline

updated 18 days ago by James W. MacDonald 67k • written 19 days ago by firestar ▴ 20

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intron BSgenome.Hsapiens.UCSC.hg38 BSgenome

updated 17 months ago by ATpoint ★ 4.6k • written 17 months ago by Lillian • 0

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HiCDCPlus BSgenome.Hsapiens.UCSC.hg38

updated 18 months ago by merve.sahn • 0 • written 2.0 years ago by Yue • 0

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705

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BSgenome.Hsapiens.UCSC.hg38 BSgenome.Hsapiens.UCSC.hg38.masked

2.6 years ago Bogdan ▴ 670

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864

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org.Hs.eg.db BSgenome.Hsapiens.UCSC.hg38

3.9 years ago Konstantinos Yeles ▴ 80

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BSgenome.Hsapiens.UCSC.hg38

updated 3.9 years ago by ahorn720 ▴ 10 • written 3.9 years ago by rohitsatyam102 ▴ 20

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annotation genome hg38 TxDb.Hsapiens.UCSC.hg38.knownGene BSgenome.Hsapiens.UCSC.hg38

updated 4.8 years ago by kayla.interdonato ▴ 160 • written 4.8 years ago by jam526 • 0

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Comment: Running multiple KNN queries in parallel by SamGG ▴ 360

Thank you for your detailed answer, I appreciate it and your work.

Answer: Running multiple KNN queries in parallel by Aaron Lun ★ 28k

That is correct - you can't pass the prebuilt objects to different processes. Maybe `MulticoreParam()` might work on POSIX systems but I'm …

Answer: RSubread output significantly different from bash Subread output by Gordon Smyth 52k

The difference (as ATpoint has correctly pointed out) is that Rsubread::featureCounts counts multi-mapping reads by default whereas the com…

Answer: Deseq2 Error in solve.default(qr.R(qrx)) : 'a' (1 x 0) must be square by Michael Love 43k

I would check the rank of your model matrix, and perhaps meet with a local statistician who can help you create an appropriate design matri…

Comment: sva: get a sv for RIN scores by gabriel.hoffman ▴ 170

Agreed. I'll add that with small sample size, a covariate can explain some fraction of expression variation even under the null.

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Answer: Running multiple KNN queries in parallel

Answer: RSubread output significantly different from bash Subread output

Answer: How to annotate a limma Elist raw class object with an annotation file

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