Bioconductor Cager

Showing : cager • reset

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2.3k

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cager

5.6 years ago Pengcheng Yang ▴ 60

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1.2k

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CAGEr

updated 10 months ago by Charles Plessy ▴ 180 • written 17 months ago by Meng ▴ 30

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2.1k

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CAGEr cage

updated 2.7 years ago by jingxian.18 • 0 • written 8.3 years ago by Vivek.b ▴ 100

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1.2k

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cager

5.6 years ago Pengcheng Yang ▴ 60

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1.2k

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CAGEr IRanges aggregateTagClusters

4.0 years ago mirkocelii ▴ 40

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2.0k

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CAGEr BAM software error R biostrings

updated 6.8 years ago by Charles Plessy ▴ 180 • written 6.8 years ago by orzechowska.mag ▴ 10

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1.3k

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CTSS clustering tag per million tag counts CAGEr

updated 2.5 years ago by Charles Plessy ▴ 180 • written 5.0 years ago by regcastillo1990 • 0

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1.3k

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cager

5.6 years ago Pengcheng Yang ▴ 60

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846

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CAGEr quantilePositions

4.0 years ago mirkocelii ▴ 40

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839

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CAGEr

updated 2.5 years ago by Charles Plessy ▴ 180 • written 3.1 years ago by MatteoP ▴ 10

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1.0k

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CAGEr

updated 6.6 years ago by Charles Plessy ▴ 180 • written 6.6 years ago by bo_yan ▴ 10

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885

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cager

6.0 years ago Jingwen ▴ 10

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857

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CAGEr CAGEset quantile CAGEexp

4.0 years ago mirkocelii ▴ 40

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1.3k

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cager cage ctss

updated 4.0 years ago by Charles Plessy ▴ 180 • written 4.9 years ago by sarac ▴ 20

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914

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TSS promoter cage cager

5.5 years ago bharata1803 ▴ 60

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1.1k

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BRAIN CAGEr BRAIN CAGEr

updated 6.0 years ago by Charles Plessy ▴ 180 • written 9.8 years ago by Tobias Hohenauer ▴ 10

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1.1k

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CAGEr

updated 9.3 years ago by James W. MacDonald 65k • written 9.3 years ago by calibula2000 • 0

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911

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cager CAGEr

5.5 years ago Zhong JW • 0

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1.1k

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CAGEr

updated 2.7 years ago by Charles • 0 • written 3.7 years ago by leehami7407 • 0

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478

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CAGEr

3.1 years ago MatteoP ▴ 10

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970

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CAGEr

updated 2.5 years ago by Charles Plessy ▴ 180 • written 2.7 years ago by Sergio • 0

21 results • Page 1 of 1

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30

Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…

Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by makala • 0

Thanks a lot!

Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by Erik Wright ▴ 150

Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by Matthew Thornton ▴ 360

So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!

Votes

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?

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