Bioconductor Quantile

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539

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R quantile list

8 months ago sat • 0

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667

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Quantile noob Normalization minfi minfiDataEPIC

updated 15 months ago by James W. MacDonald 64k • written 15 months ago by mikat • 0

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1.0k

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microarray quantile expression R Normalization

updated 2.4 years ago by Konstantinos Yeles ▴ 80 • written 2.4 years ago by mohammedtoufiq91 ▴ 10

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716

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CAGEr CAGEset quantile CAGEexp

3.6 years ago mirkocelii ▴ 40

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1.6k

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normalization quantile preprocesscore

updated 5.7 years ago by James W. MacDonald 64k • written 5.7 years ago by KVC_bioinfo • 0

5 results • Page 1 of 1

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Comment: GOslim missing GO term by amanda • 0

Thank you for the advice and many thanks! It is WGCNA analysis. I will try your method today and see if there are some consistencies.

Comment: GOslim missing GO term by James W. MacDonald 64k

Is this a WGCNA analysis (multiple co-expression clusters sounds like WGCNA)? If so, none of that is inferential or easily interpreted. It …

Comment: GOslim missing GO term by amanda • 0

For each group, I generated multiple co-expression clusters, and within each cluster, cluster PC1 was correlated with PC1 of multiple clini…

Comment: GOslim missing GO term by James W. MacDonald 64k

What do you mean by 'enriched with ... GO terms from their correlations with clinical traits'? Are you doing a GO hypergeometric or somethi…

Comment: GOslim missing GO term by amanda • 0

I have multiple groups to compare with, and each enriched with hundreds of GO terms from their correlations with clinical traits (top1 pval…

Votes

Comment: Why is DMRcate not available for Bioconductor version 3.18?

Comment: limma::voom vs edgeR::voomLmFit - when to use?

Answer: limma::voom vs edgeR::voomLmFit - when to use?

Awards • All

Scholar to James W. MacDonald 64k

Scholar to Assa Yeroslaviz ★ 1.5k