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2.0k

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txdb granges cds orf R

updated 6.5 years ago by James W. MacDonald 67k • written 6.5 years ago by q.thomas • 0

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1.7k

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Annotatr CDS Exon UTR

updated 6.9 years ago by rcavalca ▴ 140 • written 6.9 years ago by xie186 • 0

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1.8k

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genomeintervals UTRs exons CDS GenomicRanges

updated 7.4 years ago by Michael Lawrence ★ 11k • written 7.4 years ago by rubi ▴ 110

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2.2k

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biomart bioconductor grangeslist cds ribosome profiling

updated 7.6 years ago by Hervé Pagès 16k • written 7.6 years ago by Walter F. Baumann ▴ 10

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2.9k

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genomicfeatures txdb.hsapiens.ucsc.hg19.knowngene cds

8.3 years ago madsheilskov ▴ 10

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2.1k

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cds

9.0 years ago KB ▴ 50

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2.5k

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genomicfeatures genomicranges cds overlap

updated 9.1 years ago by Michael Lawrence ★ 11k • written 9.1 years ago by madsheilskov ▴ 10

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1.6k

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genomicfeatures genomicranges cds overlap

updated 3.1 years ago by balajee • 0 • written 9.1 years ago by madsheilskov ▴ 10

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Comment: How to get around the warning message: mzR has been built against a different Rc by Nan • 0

Hello, I was wondering if you were able to resolve this issue? I've recently encountered a similar problem and would like to ask for your a…

Answer: EuroBioC2023 abstract submission closing soon! by excess.gecko.shso • 0

Don't miss out! EuroBioC2023 abstract submissions are nearing the deadline. Sharpen your scientific [Wordle Game][1] skills and submit your…

Answer: EuroBioC2024 abstract submission is open! by excess.gecko.shso • 0

EuroBioC2024 abstract submissions are now open! Join the Oxford conference from Sep 4-6. Submit your abstract by April 26 for short talks, …

Comment: Cross-validation with multiple control subgroups in limma by Ali Barry ▴ 40

Thanks so much for taking the time here, the insights are much appreciated. I suspected I'd have to ad hoc compare results if I did repeat …

Answer: Cross-validation with multiple control subgroups in limma by Gordon Smyth 52k

limma doesn't do cross-validation or resampling. Like most classical linear modeling procedures in statistics, limma uses a statistical mod…

Votes

Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?

Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio

C: edgeR and lack of counts ID on CPM matrix

A: DESeq2 Following RSEM

A: importing RSEM data into DESeq2

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