Showing : cds • reset
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4
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Merging each element of a list of Genomic range
txdb granges cds orf R
updated 7.4 years ago by 68k • written 7.4 years ago by • 0
2
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1
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2.0k
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Extracting UTRs from exon and CDS data
genomeintervals UTRs exons CDS GenomicRanges
updated 8.3 years ago by ★ 11k • written 8.3 years ago by ▴ 110
3
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1
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2.4k
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Extracting Coordinates of startcodon from Grangeslist
biomart bioconductor grangeslist cds ribosome profiling
updated 8.5 years ago by 16k • written 8.5 years ago by ▴ 10
2
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2
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3.3k
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Get the genomic coordinates for the coding sequence (CDS) of a gene
genomicfeatures txdb.hsapiens.ucsc.hg19.knowngene cds
9.2 years ago madsheilskov ▴ 10
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how to get complete cds annotation information ?
cds
9.9 years ago KB ▴ 50
2
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10
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3.0k
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How to find the amino acid codons corresponding to a subset of a range of genomic positions
genomicfeatures genomicranges cds overlap
updated 9.9 years ago by ★ 11k • written 9.9 years ago by ▴ 10
0
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1
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1.8k
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How to find the amino acid codons corresponding to a subset of a range of genomic positions
genomicfeatures genomicranges cds overlap
updated 4.0 years ago by • 0 • written 9.9 years ago by ▴ 10
7 results • Page 1 of 1
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Comment: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif by Matthew Thornton ▴ 380
WOW! Thank you so much for the information. I will do this.
Comment: "Watched Tags" are being erased rather than updated by RalphSavage99 • 0
Thanks for sharing https://github.com/Bioconductor/support.bioconductor.org/issues/112
Answer: Add additional maintainer for MOFA2 by shepherl 4.2k
These requests are best on the bioc-devel @ r-project.org or a request to maintainer @ bioconductor.org -- We would ideally need the curre…
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Votes
Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
Using edgeR or DESeq2 to analyze allele-specific expression?
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
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