Showing : chipqcreport • reset
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Empty ChipQC Report
ChipQCReport
updated 22 months ago by • 0 • written 24 months ago by • 0
3
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5
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2.8k
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ChIPQC - can't read in bam files
chipqc chipqcreport
6.2 years ago molly_the_minotaur ▴ 30
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2
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1.1k
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ChipQCreport coverage plot failure?
ChipQC chipqcreport
6.3 years ago tapio.envall • 0
0
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4
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1.8k
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Unhelpful Errors Running ChIPQC on Computing Cluster
chipqc chipqcreport
7.3 years ago • updated 7.2 years ago jared.andrews07 ▴ 30
0
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1
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2.4k
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Error computing metrics with ChIPQC (Bioconductor v3.5, ChIPQC v2.1.12)
chipqc chipqcreport
updated 7.4 years ago by ▴ 420 • written 7.4 years ago by • 0
1
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3
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1.3k
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ChIPQC installation does not force latest DiffBind version
chipqc diffbind chipqcreport
updated 7.5 years ago by ▴ 420 • written 7.5 years ago by ▴ 50
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4
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1.9k
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ChIPQCreport Total number of duplicates differs from multiqc/fastqc & RelCC is Inf
ChIPQC ChIPQCreport
updated 7.5 years ago by ▴ 420 • written 7.5 years ago by ▴ 60
4
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2
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1.5k
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ChIPQC : ChIPQCreport(experiment) swap memory overload
ChIPQC ChIPQCreport
updated 7.5 years ago by ▴ 420 • written 7.5 years ago by ▴ 60
8 results • Page 1 of 1
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Answer: Deseq2 res Function by Michael Love 43k
> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…
Answer: ANOVA like approach of edgeR by Gordon Smyth 51k
You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…
Answer: Create Illmina bead summary data by Gordon Smyth 51k
GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…
Comment: Help with RSEM counts: do I transpose matrix? by NB • 0
OK thank you.
Comment: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k
You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.
Votes
Answer: Deseq2 res Function
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification
Answer: ANOVA like approach of edgeR
Answer: ANOVA like approach of edgeR
Comment: ANOVA like approach of edgeR
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