Bioconductor Chipqcreport

Showing : chipqcreport • reset

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chipqc chipqcreport

6.7 years ago • updated 6.6 years ago jared.andrews07 ▴ 30

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chipqc diffbind chipqcreport

updated 6.9 years ago by Thomas Carroll ▴ 420 • written 6.9 years ago by Coby Viner ▴ 50

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ChIPQC ChIPQCreport

updated 6.9 years ago by Thomas Carroll ▴ 420 • written 6.9 years ago by ZheFrench ▴ 50

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chipqc chipqcreport

updated 6.9 years ago by Thomas Carroll ▴ 420 • written 6.9 years ago by Roger • 0

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ChIPQC ChIPQCreport

updated 6.9 years ago by Thomas Carroll ▴ 420 • written 6.9 years ago by ZheFrench ▴ 50

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ChipQC chipqcreport

5.7 years ago tapio.envall • 0

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chipqc chipqcreport

5.6 years ago molly_the_minotaur ▴ 30

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525

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ChipQCReport

updated 15 months ago by Okan • 0 • written 17 months ago by stacy.genovese • 0

8 results • Page 1 of 1

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Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …

Answer: PCA plot suggestions by Michael Love 41k

For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10

Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…

Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k

Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…

Answer: ATACseq merge peaks by ATpoint ★ 4.0k

That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…

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Answer: Math expression in shapeCustom legend in EnhancedVolcano

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length

Comment: Deseq2. decontXcounts not integers. Useful alternative?

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

biomaRt error: database disk image is malformed

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