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clariom
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Aligning Clariom D against reference Genome and transcriptome pipeline
Clariom
Align
MicroarrayData
Alignment
Microarray
14 months ago
jsharif
• 0
1
vote
5
replies
1.2k
views
Correct annotation R package for human clariom array analysis
clariom
oligo
affycoretools
pd.hugene.2.0.st
updated 5.1 years ago by
James W. MacDonald
65k • written 5.1 years ago by
svlachavas
▴ 830
1
vote
3
replies
852
views
Selecting probe data from Clariom D assays using the fid probe tags
clariom
pd.clariom.d.human
updated 5.5 years ago by
James W. MacDonald
65k • written 5.5 years ago by
AliStair Rust
• 0
1
vote
1
reply
979
views
RNA degradation plot for Clariom S and Clariom D
Rna degradation
Clariom
updated 6.1 years ago by
James W. MacDonald
65k • written 6.1 years ago by
kritikamish99
▴ 10
2
votes
4
replies
2.2k
views
affycoretools annotateEset problem using Clariom D arrays
affycoretools
clariom
updated 6.7 years ago by
James W. MacDonald
65k • written 6.7 years ago by
willj
▴ 30
2
votes
2
replies
1.0k
views
paCalls with Clariom Chips
oligo
microarray
clariom
updated 6.8 years ago by
James W. MacDonald
65k • written 6.8 years ago by
kmvaldez2
• 0
0
votes
0
replies
785
views
genefu and clariom d
clariom
genefu
6.8 years ago
info
• 0
7 results • Page
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Recent ...
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Comment: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
You already ran a temporal assay. Now you can compare each time point to the baseline. The interaction term is only applicable if you have…
Comment: Timecourse RNASeq analysis
by
Aurora
• 0
I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…
Comment: Once again a "Model matrix not full rank"
by
arfranco
▴ 130
But.. How to run a temporal assay?
Comment: Deseq2 and Normalization of RNA sequencing data
by
kcarey
• 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP
by
Gordon Smyth
50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Votes
A: Print Differentially Expressed Exons From Dexseq Results
stuck on unimplemented type 'list' in 'EncodeElement'
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
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