Showing : classification • reset
0
votes
6
replies
1.2k
views
where to start?
Classification Clustering Category Classification Clustering Category
updated 19.0 years ago by ★ 7.4k • written 19.0 years ago by ▴ 40
0
votes
6
replies
1.6k
views
ANN: Bioconductor Release 1.7 is available
aCGH Microarray Annotation Classification annotate edd hexbin SAGElyzer Rgraphviz RMAGEML
updated 18.5 years ago by ▴ 190 • written 18.5 years ago by ★ 7.4k
1
vote
5
replies
1.2k
views
CRImage createTrainingSet package is not available to install
classification segmentation cell types image analysis crimage
5.7 years ago Jenny.chien • 0
0
votes
5
replies
4.5k
views
probability of a point membership to a certain cluster
Classification Classification
updated 12.3 years ago by ★ 13k • written 12.3 years ago by ▴ 60
0
votes
5
replies
3.1k
views
DESeq2
Normalization Classification Clustering DESeq cqn DESeq2 Normalization Classification cqn
updated 11.1 years ago by 41k • written 11.1 years ago by ★ 13k
0
votes
4
replies
1.6k
views
RandomForest, supervised machine learning and uncertainty
GO Classification GO Classification
updated 13.4 years ago by 6.7k • written 13.4 years ago by ▴ 370
0
votes
3
replies
1.1k
views
Nonorthogonal multiple comparisons in Limma/ Books on Bayesian Statistics
Bayesian Classification limma bridge Bayesian Classification limma bridge
19.7 years ago Gordon Smyth 50k
0
votes
3
replies
2.8k
views
PAMR- Package: Workflow and/or other methods
Classification Classification
updated 11.4 years ago by 21k • written 11.4 years ago by ▴ 70
0
votes
3
replies
1.0k
views
Generating random gene lists: does sample/resample generate random sets
Classification Classification
15.6 years ago Scott Ochsner ▴ 300
0
votes
3
replies
1.6k
views
Bioconductor 2.3 is released
aCGH Sequencing miRNA Microarray Visualization Bayesian Classification Survival Yeast LPE
15.5 years ago Patrick Aboyoun ★ 1.6k
0
votes
3
replies
1.5k
views
Suitable learning sets, gene selection methods and classification methods for low replicated microarray samples
Classification CMA Classification CMA
updated 9.8 years ago by 21k • written 9.8 years ago by ★ 13k
0
votes
3
replies
1.5k
views
MLSeq Mathematical Concepts
Classification edgeR DESeq MLSeq Classification edgeR DESeq MLSeq
updated 10.0 years ago by ★ 13k • written 10.0 years ago by ★ 1.5k
0
votes
3
replies
3.0k
views
Subsetting expression sets for mass spec data - second ask
Classification Cancer PROcess Classification Cancer PROcess
updated 11.4 years ago by 21k • written 11.4 years ago by ▴ 300
0
votes
3
replies
987
views
HTqPCR and limma and factorial design with no replicates
Microarray qPCR Classification limma HTqPCR ASSIGN Microarray qPCR Classification limma
updated 14.2 years ago by ★ 6.0k • written 14.2 years ago by ▴ 810
0
votes
2
replies
913
views
RLMM questions
GO Classification cdf affy RLMM GO Classification cdf affy RLMM
updated 17.7 years ago by ★ 2.4k • written 17.7 years ago by ▴ 20
0
votes
2
replies
1.2k
views
Hierarchical clustering and shrinking centroids...
Classification Clustering pamr Classification Clustering pamr
updated 19.9 years ago by ★ 1.0k • written 19.9 years ago by ▴ 180
0
votes
2
replies
1.7k
views
Generating random gene lists: does sample/resample generate random sets
Classification Classification
updated 15.6 years ago by ▴ 750 • written 15.6 years ago by ▴ 300
0
votes
2
replies
1.4k
views
Problems with Affy names / BGA
Classification affy made4 Classification affy made4
updated 17.4 years ago by ▴ 510 • written 17.4 years ago by ▴ 310
0
votes
2
replies
1.3k
views
feature selection
Classification Classification
updated 21.1 years ago by ▴ 360 • written 21.1 years ago by ▴ 20
0
votes
2
replies
1.1k
views
OT: van 't Veer (2002) classifier
Classification Cancer Breast Classification Cancer Breast
updated 14.7 years ago by ★ 1.3k • written 14.7 years ago by ▴ 110
0
votes
2
replies
1.1k
views
Ranked genes generated by learning datasets and Differentially expressed genes generated by original data
Classification Classification
updated 9.8 years ago by 21k • written 9.8 years ago by ★ 13k
1
vote
2
replies
1.5k
views
Possible methodologies of machine learning in R that can assimilate continuous variables along gene expression data for microarray classification
classification machinelearning microarray multivariate caret
updated 8.5 years ago by ★ 13k • written 8.5 years ago by ▴ 830
3
votes
2
replies
1.1k
views
Using deseq2 with batch effects and classification as downstream analysis
deseq2 batch effect classification
updated 5.5 years ago by 41k • written 5.5 years ago by • 0
0
votes
1
reply
1.1k
views
HTqPCR and limma and factorial design with no replicates
Microarray qPCR Classification limma HTqPCR ASSIGN Microarray qPCR Classification limma
updated 14.3 years ago by ★ 6.0k • written 14.3 years ago by ▴ 810
0
votes
1
reply
933
views
Diagonal LDA in MLInterfaces
Classification Classification
updated 17.6 years ago by 25k • written 17.6 years ago by ▴ 90
0
votes
1
reply
868
views
please fix link error in your bioconductor site
Microarray Classification Microarray Classification
updated 21.8 years ago by ★ 3.9k • written 21.8 years ago by ▴ 10
1
vote
1
reply
2.2k
views
edgeR GLM fitted values
edgeR GLM classification rnaseq
updated 8.2 years ago by ★ 28k • written 8.2 years ago by ▴ 10
0
votes
1
reply
1.1k
views
classification method applied to microarrays (CMA package)
Classification CMA Classification CMA
updated 14.5 years ago by ▴ 10 • written 14.5 years ago by ▴ 190
0
votes
1
reply
1.0k
views
Questions about the correct implementation of the function plotRLDF from R package limma regarding classification of a microarray dataset
limma microarray plotRLDF classification
7.9 years ago svlachavas ▴ 830
0
votes
1
reply
1.1k
views
Classification with large number of qualitative variables
R classification qualitative variables high dimensionnal
updated 7.4 years ago by ▴ 130 • written 7.4 years ago by • 0
0
votes
1
reply
1.5k
views
Support vector regression
Classification Regression Classification Regression
updated 10.1 years ago by ★ 13k • written 10.1 years ago by ★ 13k
0
votes
1
reply
683
views
decideTests with nestedF
Classification Classification
18.8 years ago Lei Jiang ▴ 20
0
votes
1
reply
1.2k
views
Sample size estimation for independent validation set
Microarray Classification PROcess Microarray Classification PROcess
updated 14.4 years ago by ▴ 110 • written 14.4 years ago by ▴ 10
0
votes
1
reply
1.5k
views
Seeking assistance on ROC
Microarray GO Classification ROC graph ASSIGN Microarray GO Classification ROC graph
updated 14.2 years ago by ★ 13k • written 14.2 years ago by 21k
0
votes
0
replies
1.5k
views
Correcting for covariate (very unbalanced design)
Microarray Classification limma Microarray Classification limma
15.5 years ago Renaud Gaujoux ▴ 170
0
votes
0
replies
1.5k
views
CMA package: variable selection with limma
Microarray Classification Regression limma CMA Microarray Classification Regression limma
15.2 years ago Renaud Gaujoux ▴ 170
0
votes
0
replies
1.3k
views
Post-doc bio-informatics in next generation sequencing (36 h) (VUMC - The Netherlands)
Sequencing Genetics Classification Cancer PROcess Sequencing Genetics Classification
14.5 years ago Reek, J. ▴ 10
0
votes
0
replies
720
views
转发： 回复： Patent issues of classification algorithms
Microarray Classification Cancer Microarray Classification Cancer
14.4 years ago Martin Morgan 25k
0
votes
0
replies
1.0k
views
回复： 回复： : Patent issues of classification algorithms
Microarray Classification Microarray Classification
14.4 years ago qinghua xu ▴ 110
0
votes
0
replies
1.2k
views
Statistical approach to compare differentiall expressed gene lists
Microarray Classification Microarray Classification
14.4 years ago qinghua xu ▴ 110
0
votes
0
replies
1.2k
views
compare function in CMA package
Classification CMA Classification CMA
14.3 years ago Javier Pérez Florido ▴ 840
0
votes
0
replies
1.5k
views
R Course 28-29 March in Heidelberg (EMBL)
Classification Classification
14.2 years ago Wolfgang Huber ★ 13k
0
votes
0
replies
17k
views
1000 R tutorials/Links
Sequencing Microarray Genetics Visualization Network Bayesian Classification Clustering
13.9 years ago David Lyon ▴ 340
0
votes
0
replies
879
views
Fwd: question regarding to MLInterface
Network Classification Network Classification
13.5 years ago Vincent J. Carey, Jr. 6.7k
0
votes
0
replies
2.4k
views
'Empty model' error during Monte Carlo cross-validation of SVM classification with the CMA package
Microarray Classification limma CMA Microarray Classification limma CMA
13.2 years ago Santosh Patnaik ▴ 30
0
votes
0
replies
740
views
Question about MCRestimate
Classification Classification
11.9 years ago ZHENG FU ▴ 10
0
votes
0
replies
1.4k
views
Overlapping ROC plots
Classification ROC graph Classification ROC graph
11.8 years ago Yadav Sapkota ▴ 130
0
votes
0
replies
951
views
Questions regarding MCRestimate package
Classification MCRestimate Classification MCRestimate
11.7 years ago Guest User ★ 13k
0
votes
0
replies
1.1k
views
CAMDA 2013 Challenge: Big Data in Life Sciences
Sequencing Microarray Genetics Classification Clustering Regression Sequencing Microarray
11.1 years ago CAMDA 2013 ▴ 30
0
votes
0
replies
1.4k
views
CfP: CAMDA 2013 - 12th International Conference on Critical Assessment of Massive Data Analysis
Genetics Classification Regression Genetics Classification Regression
11.0 years ago CAMDA 2013 ▴ 30
50 results • Page 1 of 1
Recent ...
Replies
Comment: Why p value inconsistent when using different number of pathway score? by Chris • 0
Hi Robert, if two conditions don't have hundreds of differential express genes ( in some conditions such as peripheral blood Alzheimer vs n…
Answer: Dominance Index for Shotgun Metagenomics Data by Leo Lahti ▴ 40
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions by Michael Love 41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Votes
Answer: Dominance Index for Shotgun Metagenomics Data
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
Awards • All
Popular Question to Leo Lahti ▴ 40
Scholar to James W. MacDonald 65k
Popular Question to shepherl 3.8k
Scholar to Michael Love 41k
Supporter to JKim • 0
Locations • All
The city by the bay, 5 minutes ago
EMBL Heidelberg, 19 minutes ago
INDIA, 1 hour ago
WEHI, Melbourne, Australia, 2 hours ago
Canada, 2 hours ago
Traffic: 479 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6