Bioconductor Co-expression

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network co-expression WGCNA

updated 12 months ago by andres.firrincieli ▴ 50 • written 12 months ago by ikumar2000 ▴ 10

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wgcna co-expression

updated 4.1 years ago by mikhael.manurung ▴ 270 • written 4.2 years ago by Lin ▴ 50

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wgcna network co-expression rnaseq

updated 4.4 years ago by Peter Langfelder ★ 2.8k • written 4.4 years ago by ag1805x ▴ 80

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WGCNA R network co-expression

updated 8 months ago by Peter Langfelder ★ 2.8k • written 4.4 years ago by avelarbio46 ▴ 10

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Comment: Speeding up of DelayedArray::write_block() by Koki ▴ 10

I don't know the details but do you mean using `HDF5RealizationSink` or `TENxRealizationSink` will make it possible to writing sparse multi…

Comment: DelayedArray::read_sparse_block by Koki ▴ 10

Ok, I understood. How about "writing" to HDF5? Are you going to implement `write_block_as_sparse` in `SparseArray` package?

Comment: DelayedArray::read_sparse_block by Hervé Pagès 16k

> So do you means the specification change from DelayedArray's read_sparse_block to SparseArray's read_block_as_sparse will accelerate the …

Comment: DelayedArray::read_sparse_block by Koki ▴ 10

Thanks for your reply. So do you means the specification change from `DelayedArray`'s `read_sparse_block` to `SparseArray`'s `read_block_a…

Comment: DMRcate design by James W. MacDonald 63k

That's what identical context means.

Votes

Answer: What MetaPhlAn3 database was used in cMD 3?

Comment: Speeding up of DelayedArray::write_block()

Answer: DelayedArray::read_sparse_block

Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available

Comment: Timely differentially expressed genes

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