Bioconductor Combat sva

Showing : combat sva • reset

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949

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combat combat sva pamr limma design matrix sva

5.7 years ago jmsendoya • 0

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833

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combat sva batch effect

5.9 years ago Fp • 0

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639

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combat sva

6.1 years ago jonellevillar • 0

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1.2k

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combat combat sva

6.6 years ago Miss Agnieszka Aleksandra Golicz ▴ 40

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1.2k

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combat sva microarry Jeff leek

6.9 years ago DataFanatic ▴ 10

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897

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combat sva sva

7.0 years ago alice.anlind • 0

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3.5k

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SVA combat sva leek

updated 3.0 years ago by chase.mateusiak • 0 • written 7.1 years ago by amoltej ▴ 10

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combat sva input files

7.2 years ago arisarkar88 ▴ 40

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1.2k

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batch effect combat sva sva

7.2 years ago Ahdee ▴ 50

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962

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combat sva

7.5 years ago vinnu260 ▴ 10

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1.6k

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combat sva batch effect comba

updated 7.6 years ago by Vegard Nygaard ▴ 110 • written 7.6 years ago by amoltej ▴ 10

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2.3k

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svaseq combat sva RANseq batcheffect removebatcheffect

updated 7.6 years ago by Jakub ▴ 50 • written 7.6 years ago by amoltej ▴ 10

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939

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combat sva

7.7 years ago kkwon • 0

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1.7k

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affymetrix microarrays sva combat sva batch effect plotMDS

updated 7.7 years ago by Jeff Leek ▴ 650 • written 7.8 years ago by svlachavas ▴ 830

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SVA combat sva batch effect

updated 7.8 years ago by Jeff Leek ▴ 650 • written 7.8 years ago by amoltej ▴ 10

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ENmix combat.mc illumina450k combat sva

7.9 years ago DSP • 0

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combat sva sga combat batch effect

8.1 years ago John Townsend ▴ 20

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combat sva SVA sva ComBat batch effect

updated 8.1 years ago by W. Evan Johnson ▴ 850 • written 8.1 years ago by John Townsend ▴ 20

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2.5k

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R Combat SVA

updated 8.4 years ago by Steve Lianoglou ★ 13k • written 8.4 years ago by nazaninhoseinkhan • 0

19 results • Page 1 of 1

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Comment: Running ENmix with mouse methylation manifest: readidat error - Error in readman by kred • 0

I tried the latest version and encountered the same issues. The manifest file I downloaded is the .csv from the following link: https://em…

Comment: Error in gseDO function by Javier • 0

As you say it is not a typical experiment of discovery, actually it is carried out in a different way, with a preselected set of genes. We …

Answer: Counter-directional LFC shrinkage by swbarnes2 ★ 1.4k

The y axes in those plots are logged. The average for condition1 is going to be higher than condition2 because of the very high outliers. …

Comment: Cannot install oligo on Fedora by Guido Hooiveld ★ 4.0k

Thanks for all suggestions and getting to the bottom of this! Unfortunately, fixing C code goes way above my skill level, so I cannot contr…

Comment: Cannot install oligo on Fedora by James W. MacDonald 66k

I think the solution is for the C code in `oligo` to be updated to work with more modern versions of `zlib`. The `zlibbioc` package is real…

Votes

Reduce the number of nodes appear in the cnetplot of clusterprofiler

A: DESeq2: add annotations (from data frame) to DESeqDataSet

Answer: Error in gseDO function

Comment: what the test method for enrichGO in clusterProfiler?

A: Comparison between two different group's pathway analysis results

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