Biostar Svaseq

Showing : svaseq • reset

votes

127

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sva svaseq surrogate variable analysis

updated 15 months ago by James W. MacDonald 57k • written 15 months ago by Mozart ▴ 20

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306

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svaseq sva

2.3 years ago flippy23 • 0

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356

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MEDIPS svaseq sva

updated 2.5 years ago by Lukas Chavez ▴ 550 • written 2.5 years ago by tofukaj • 0

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386

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deseq2 svaseq

2.5 years ago bioinfo • 0

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616

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edger sva svaseq limma

updated 3.2 years ago by Ryan C. Thompson 7.6k • written 3.2 years ago by cats_dogs ▴ 20

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1.5k

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DESeq2 sva svaseq batch effect correction

3.5 years ago L_K • 0

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556

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svaseq batcheffectcorrection

3.7 years ago burcu.atasu • 0

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735

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ruvseq svaseq edaseq

updated 3.7 years ago by davide risso ▴ 870 • written 3.7 years ago by llo ▴ 10

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725

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sva svaseq batch effect batch effects batch effect correction

3.9 years ago vedran.franke • 0

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1.0k

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deseq2 svaseq

updated 4.0 years ago by Michael Love 33k • written 4.0 years ago by gpalidwor ▴ 10

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819

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sva svaseq

updated 4.1 years ago by Guido Hooiveld ★ 3.0k • written 4.1 years ago by wamiqsaifi • 0

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1.8k

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limma sva svaseq

updated 4.4 years ago by Aaron Lun ★ 27k • written 4.4 years ago by Bogdan ▴ 620

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922

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svaseq dexseq

updated 4.5 years ago by Alejandro Reyes ★ 1.8k • written 4.5 years ago by tofukaj • 0

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984

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svaseq combat sva RANseq batcheffect removebatcheffect

updated 4.8 years ago by Jakub ▴ 30 • written 4.8 years ago by amoltej ▴ 10

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3.0k

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deseq2 svaseq

4.8 years ago Akula, Nirmala NIH/NIMH [C] ▴ 190

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959

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deseq2 sva svaseq

updated 4.9 years ago by Michael Love 33k • written 4.9 years ago by szenitha • 0

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1.4k

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sva svaseq batcheffectcorrection

updated 5.0 years ago by Jeff Leek ▴ 610 • written 5.0 years ago by szenitha • 0

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2.2k

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deseq2 sva svaseq pca

5.1 years ago Peter Alto ▴ 10

18 results • Page 1 of 1

Recent ...

Replies

Comment: edgeR by Gitanjali • 0

Thanks @gordonsmyth , that helped. Also how do I put 24h at the end? I want to plot the observed and fitted values for each gene across tim…

Comment: ChIPseeker genomicAnnotationPriority by hqlkjx • 0

I am meeting the same problem

Comment: cannot install edgeR on M1 Mac by Gordon Smyth 43k

OK, I understand now the issue is that you are running R compiled for the Mac M1 ARM-based processor but Bioconductor doesn't provide binar…

Comment: How can I use geom_label_repel with EnhancedVolcano? by Kevin Blighe 3.2k

Thanks! I think that I know what you want to do, but, unfortunately, that level of customisation is not possible with *EnhancedVolcano* alo…

Comment: Split mzID file with mzID() function by Brem • 0

Thank you, I've edited the post with the correct package, mzID.

Votes

ChIPseeker genomicAnnotationPriority

Answer: barcodeRanks unusual warning "In smooth.spline(x[new.keep], y[new.keep], df = df

cannot install edgeR on M1 Mac

Increasing rlm iterations for convergence in limma's normalizeRobustSpline

Awards • All

Scholar to Aaron Lun ★ 27k