Showing : complex-design • reset
3
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4
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1.6k
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Complicated unbalanced block DOE with partially paired samples and analysis
limma complex-design paired design
updated 7.7 years ago by ★ 29k • written 7.7 years ago by ▴ 10
0
votes
5
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3.0k
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getting sample size for RNAseq experiment
rnaseqpower sspa sample size sequencing complex-design
updated 9.7 years ago by ▴ 20 • written 9.7 years ago by • 0
9
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21
replies
6.8k
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limma - complex design with paired samples, sex and batch effect
limma paired samples complex-design
9.9 years ago • updated 9.8 years ago aec ▴ 90
7
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6
replies
4.7k
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Design and contrast question limma (additive or nested or duplicateCorrelation())??
limma model matrix limma design matrix complex-design
updated 10.4 years ago by ★ 29k • written 10.4 years ago by ★ 4.1k
1
vote
1
reply
3.3k
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Factorial Design with DESeq2; contrast problem.
deseq2 multiple factor design complex-design
updated 10.7 years ago by 43k • written 10.7 years ago by • 0
1
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3
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7.4k
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Combat - error - system is computationally singular
combat software error rnaseq complex-design
updated 11.1 years ago by ★ 3.0k • written 11.1 years ago by ▴ 40
7
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11
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2.9k
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Using edgeR on pre-post treatment control design
edgeR complex-design
updated 11.1 years ago by 68k • written 11.1 years ago by ▴ 20
7 results • Page 1 of 1
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Comment: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif by Matthew Thornton ▴ 380
WOW! Thank you so much for the information. I will do this.
Comment: "Watched Tags" are being erased rather than updated by RalphSavage99 • 0
Thanks for sharing https://github.com/Bioconductor/support.bioconductor.org/issues/112
Answer: Add additional maintainer for MOFA2 by shepherl 4.2k
These requests are best on the bioc-devel @ r-project.org or a request to maintainer @ bioconductor.org -- We would ideally need the curre…
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Votes
Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
Using edgeR or DESeq2 to analyze allele-specific expression?
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
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