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cytofworkflow
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FlowSOM with unrelated channels
FlowSOM
cytofWorkflow
updated 2.0 years ago by
helucro
▴ 70 • written 2.0 years ago by
Anirban
• 0
0
votes
2
replies
1.5k
views
How to use the plotExprHeatmap function to draw heat maps according to groups
grou
heatmaps
CyTOFpower
cytofWorkflow
2.1 years ago
shuangshuang
• 0
0
votes
1
reply
1.5k
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Error: all(unlist(md_cols) %in% names(md)) is not TRUE
cytofWorkflow
updated 2.1 years ago by
helucro
▴ 70 • written 2.1 years ago by
shuangshuang
• 0
0
votes
0
replies
956
views
flow cytometry differential expression through time
cytofWorkflow
cytof
diffcyt
4.2 years ago
achaillon
• 0
0
votes
0
replies
691
views
CytofWorkflow and automate the classification of cellular sub-populations
cytofWorkflow
4.2 years ago
achaillon
• 0
0
votes
0
replies
870
views
flowCore - linear transformation
cytofWorkflow
cytofworkflow
flowCore
4.3 years ago
GFM
▴ 20
0
votes
0
replies
784
views
diffcyt between cell populations
cytofWorkflow
diffcyt
4.4 years ago
GFM
▴ 20
2
votes
2
replies
1.7k
views
Updating package CATALYST
CATALYST
cytofWorkflow
updated 5.3 years ago by
Martin Morgan
25k • written 5.3 years ago by
Brent.OCarrigan
• 0
0
votes
1
reply
797
views
how to a load workflow package
cytofworkflow
5.4 years ago
jianjunchencn
• 0
0
votes
1
reply
1.1k
views
some errors in cytofWorkflow2 description
cytofWorkflow
updated 6.5 years ago by
James W. MacDonald
68k • written 6.5 years ago by
o.hunewald
• 0
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Comment: DiffBind custom normalization factor
by
Abbie
• 0
Hello! Thanks so much for adding dba.normalize and all the documentation in the manual! I'm hoping I can ask a follow-up question here. I…
Answer: CpGs with genomic positions greater than the chromosome size in EPICv2?
by
James W. MacDonald
68k
All of the annotation packages provided by Bioconductor are simply repackaging of existing data from one or more sources. In this case, the…
Comment: Using TPM from tximport of Salmon output for singscore
by
Kent
• 0
Thank you for the suggestions Michael. Would you say that after filtering out the low count genes, `rlog(counts, blind = T)` is doing the s…
Comment: Using TPM from tximport of Salmon output for singscore
by
Michael Love
43k
For clustering generally we recommend `vst()` see the workflow for example. For working with individual samples, I can see how a scaling/t…
Comment: DESeq2 model - How to test case/control time course model when taking account wi
by
Michael Love
43k
I'd recommend working with a local statistician or someone familiar with linear models in R. I have to reserve my time on the support site …
Votes
clusterProfiler-GO enrichment Error
A: Machine learning in R book
Data preparation and Machine learning on time course RNAseq data
Data preparation and Machine learning on time course RNAseq data
Answer: Use of org.Rn.eg.db with GRCr8 reference genome
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