Showing : cytofworkflow • reset
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FlowSOM with unrelated channels
FlowSOM cytofWorkflow
updated 13 months ago by ▴ 70 • written 13 months ago by • 0
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2
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876
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How to use the plotExprHeatmap function to draw heat maps according to groups
grou heatmaps CyTOFpower cytofWorkflow
14 months ago • updated 13 months ago shuangshuang • 0
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940
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Error: all(unlist(md_cols) %in% names(md)) is not TRUE
cytofWorkflow
updated 14 months ago by ▴ 70 • written 14 months ago by • 0
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712
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flow cytometry differential expression through time
cytofWorkflow cytof diffcyt
3.3 years ago achaillon • 0
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517
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CytofWorkflow and automate the classification of cellular sub-populations
cytofWorkflow
3.3 years ago achaillon • 0
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656
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flowCore - linear transformation
cytofWorkflow cytofworkflow flowCore
3.4 years ago GFM ▴ 20
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594
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diffcyt between cell populations
cytofWorkflow diffcyt
3.4 years ago GFM ▴ 20
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2
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1.4k
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Updating package CATALYST
CATALYST cytofWorkflow
updated 4.4 years ago by 25k • written 4.4 years ago by • 0
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1
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609
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how to a load workflow package
cytofworkflow
4.5 years ago jianjunchencn • 0
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1
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897
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some errors in cytofWorkflow2 description
cytofWorkflow
updated 5.6 years ago by 65k • written 5.6 years ago by • 0
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Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions by Michael Love 41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Answer: ATACseq merge peaks by ATpoint ★ 4.0k
That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Votes
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
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