Showing : densityplot • reset
1
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2
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2.1k
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Odd Sample after SWAN normalisation, DNA methylation analysis EPIC array
minfi normalization outliers dna methylation densityplot
7.5 years ago peter.fransquet • 0
1
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2
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1.3k
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Stacked density plots not working in for loop (graphical device crashing?)
densityplot stacked for loop
7.8 years ago • updated 7.7 years ago k.teijgeler • 0
0
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3
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2.3k
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MINFI missing samples in qcreports and densityplots
minfi illumina methylationEPIC densityplot
9.1 years ago annabelle.congras ▴ 10
2
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6
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3.3k
views
Density plots microarray
microarray limma normalization densityplot
updated 9.9 years ago by ★ 1.1k • written 9.9 years ago by ▴ 150
0
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11
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3.8k
views
assign the y-scale relation in flowViz densityplot
flowviz densityplot
updated 10.2 years ago by • 0 • written 10.9 years ago by ▴ 20
5 results • Page 1 of 1
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Comment: soGGi error by shepherl 4.3k
We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…
Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k
No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.
Comment: Questions about bacon QC and correction on EWAS results by Tikaaa2sahaaaq2c • 0
In the world of mobile games, the 88ef game download has gained traction for its performance driven design [free download][1], similar to …
Comment: using limma trend workflow in CAMERA by A.Barden ▴ 20
Do you need to set trend.var=TRUE when using camera in the limma-voom pipeline with RNA-Seq data (as apposed to limma-trend pipeline)?
Comment: Upcoming Ensembl API and data access changes - new blog post available by Tikaaa2sahaaaq2c • 0
Just as the Ensembl team transitions to a new platform for streamlined data access, diners can benefit from a digital newks menu prices con…
Votes
Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
C: Why limma, edgeR, and DESeq did not implement fold change moderation first?
Comment: using limma trend workflow in CAMERA
C: z-score with DESeq2?
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