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densityplot
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reset
1
vote
2
replies
839
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Odd Sample after SWAN normalisation, DNA methylation analysis EPIC array
minfi
normalization
outliers
dna methylation
densityplot
4.9 years ago
peter.fransquet
• 0
1
vote
2
replies
632
views
Stacked density plots not working in for loop (graphical device crashing?)
densityplot
stacked
for loop
5.1 years ago
k.teijgeler
• 0
0
votes
3
replies
1.2k
views
MINFI missing samples in qcreports and densityplots
minfi
illumina
methylationEPIC
densityplot
6.4 years ago
annabelle.congras
▴ 10
2
votes
6
replies
2.0k
views
Density plots microarray
microarray
limma
normalization
densityplot
updated 7.3 years ago by
Axel Klenk
▴ 990 • written 7.3 years ago by
Eleni Christodoulou
▴ 150
0
votes
11
replies
2.2k
views
assign the y-scale relation in flowViz densityplot
flowviz
densityplot
updated 7.5 years ago by
magomudw
• 0 • written 8.2 years ago by
peterfoster
▴ 20
5 results • Page
1 of 1
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Comment: Interpret plot from DiffBind
by
Chris
• 0
I sorted Fold decreasing. When I filter out genes with fold > 2.5 and filter out genes with fold < -2.5 and got 1287 genes appear in both s…
Comment: Interpret plot from DiffBind
by
Chris
• 0
Thank you so much. I think the function is `dba.report()`. more_open_in_disease: 79113 more_closed_in_disease: 36828 So there are 79113 pea…
Comment: Interpret plot from DiffBind
by
Chris
• 0
Hi Rory, when I run your code, I got this error: Error: unexpected ')' in: " matrices_color=list(c("white", "ma…
Comment: Can DESeq2 handle huge variations in sequencing depth among samples?
by
Gopinath
• 0
Thanks for your suggestion, Michael. I will try that strategy.
Comment: Error with IsoformSwitchAnalyzer: analyzePFAM
by
Callum
• 0
It seems that the problem doesn't occur when the input file is significantly shortened to ~20 transcripts! Please help
Votes
A: ggbio error: Objects of type OrganismDb not supported by autoplot
Answer: DeSEQ 2 Error: some values in assay are negative
DESeq2 Error from Installing a Package
Answer: Using PEER to identify hidden confounders in RNA-seq data (not working)
Comment: Error: biomaRt has encountered an unexpected server error.
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