Bioconductor Densityplot

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2.0k

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microarray limma normalization densityplot

updated 7.3 years ago by Axel Klenk ▴ 990 • written 7.3 years ago by Eleni Christodoulou ▴ 150

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632

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densityplot stacked for loop

5.1 years ago k.teijgeler • 0

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839

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minfi normalization outliers dna methylation densityplot

4.9 years ago peter.fransquet • 0

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1.2k

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minfi illumina methylationEPIC densityplot

6.4 years ago annabelle.congras ▴ 10

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2.2k

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flowviz densityplot

updated 7.5 years ago by magomudw • 0 • written 8.2 years ago by peterfoster ▴ 20

5 results • Page 1 of 1

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Comment: Interpret plot from DiffBind by Chris • 0

I sorted Fold decreasing. When I filter out genes with fold > 2.5 and filter out genes with fold < -2.5 and got 1287 genes appear in both s…

Comment: Interpret plot from DiffBind by Chris • 0

Thank you so much. I think the function is `dba.report()`. more_open_in_disease: 79113 more_closed_in_disease: 36828 So there are 79113 pea…

Comment: Interpret plot from DiffBind by Chris • 0

Hi Rory, when I run your code, I got this error: Error: unexpected ')' in: " matrices_color=list(c("white", "ma…

Comment: Can DESeq2 handle huge variations in sequencing depth among samples? by Gopinath • 0

Thanks for your suggestion, Michael. I will try that strategy.

Comment: Error with IsoformSwitchAnalyzer: analyzePFAM by Callum • 0

It seems that the problem doesn't occur when the input file is significantly shortened to ~20 transcripts! Please help

Votes

A: ggbio error: Objects of type OrganismDb not supported by autoplot

Answer: DeSEQ 2 Error: some values in assay are negative

DESeq2 Error from Installing a Package

Answer: Using PEER to identify hidden confounders in RNA-seq data (not working)

Comment: Error: biomaRt has encountered an unexpected server error.

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