Bioconductor Dependency

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package installation shortread dependency

updated 6.4 years ago by January Weiner ▴ 240 • written 7.5 years ago by joseph.elsherbini ▴ 60

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flowCore Installation dependency

updated 6.5 years ago by Jake Wagner ▴ 310 • written 6.5 years ago by Robert Baer ▴ 70

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bioconductor R go.db annotationdbi dependency

8.7 years ago Sidi.Ma • 0

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dependency github

9.8 years ago kmezhoud ▴ 10

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installation dependency library hdf5

10.2 years ago Ulrik Stervbo ▴ 30

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Answer: Question about collapsing ASVs by genus level during DESeq2 analysis by Michael Love 43k

I'll just note that microbiome stats folks tend to use other tools than DESeq2. > several ASVs belong to the same genus but are not iden…

Comment: Highly DE genes but small count difference within conditions by shy.hippopotamus.yxmb • 0

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Comment: Highly DE genes but small count difference within conditions by shy.hippopotamus.yxmb • 0

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Comment: Highly DE genes but small count difference within conditions by shy.hippopotamus.yxmb • 0

Enter the world of , where gaming meets innovation. We've created a cutting-edge marketplace that's transforming how gamers trade and conne…

Comment: copy number/LOH for Affy 100K by igkryycpinmshzugby • 0

Hi John For copy number and LOH analysis from Affymetrix 100K SNP arrays you can use aroma.affymetrix or CRLMM packages in Bioconductor. …

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Bioconductor 3.22 Released!

Comment: "Watched Tags" are being erased rather than updated

Comment: deseq2 filter the low counts

Answer: DESeq2 interactions

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