Bioconductor Deseq

Showing : deseq • reset

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314

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DESeq2 deseq

10 weeks ago Meme • 0

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335

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deseq DESeq2

updated 4 months ago by ATpoint ★ 4.1k • written 4 months ago by Hugo • 0

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522

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deseq DESeq2

5 months ago georgii.vdovin • 0

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381

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Deseq DESeq2

updated 5 months ago by Michael Love 41k • written 5 months ago by georgii.vdovin • 0

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654

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Z-score RNASeqData Deseq DESeq2

updated 7 months ago by James W. MacDonald 65k • written 7 months ago by khaserdene99 • 0

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889

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DESeq DESeq2

updated 9 months ago by ATpoint ★ 4.1k • written 9 months ago by Abir.khazaal ▴ 10

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657

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DESeq2 apeglm DESeq ApeGLM Ashr

updated 9 months ago by Michael Love 41k • written 9 months ago by Ndimensional ▴ 20

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26k

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deseq deseq2

updated 9 months ago by Erika • 0 • written 9.3 years ago by c.lieftink@nki.nl ▴ 40

8 results • Page 1 of 1

Recent ...

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Comment: Once again a "Model matrix not full rank" by James W. MacDonald 65k

You already ran a temporal assay. Now you can compare each time point to the baseline. The interaction term is only applicable if you have…

Comment: Timecourse RNASeq analysis by Aurora • 0

I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…

Comment: Once again a "Model matrix not full rank" by arfranco ▴ 130

But.. How to run a temporal assay?

Comment: Deseq2 and Normalization of RNA sequencing data by kcarey • 0

Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …

Answer: NEED FOR NESSASORY HELP by Gordon Smyth 50k

Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…

Votes

A: Print Differentially Expressed Exons From Dexseq Results

stuck on unimplemented type 'list' in 'EncodeElement'

Bioconductor 3.19 is Released!

A: Error in DESeqDataSet : some values in assay are not integers

Bioconductor 3.19 is Released!

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