Bioconductor Designmatrix

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R designmatrix edgeR limma model.matrix

17 months ago Abdul ▴ 20

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Limma designMatrix

updated 5.8 years ago by Aaron Lun ★ 28k • written 5.8 years ago by Keifa ▴ 10

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DESeq2 designmatrix edgeR limma tidybulk

updated 15 months ago by Michael Love 42k • written 15 months ago by aditya.m ▴ 10

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limma microarray designmatrix

updated 7.8 years ago by Aaron Lun ★ 28k • written 7.8 years ago by nashchem • 0

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948

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MutlipleFactors DesignMatrix edgeR

3.2 years ago Debayan ▴ 20

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DESeq2 limma modelmatrix edgeR designmatrix

updated 2.5 years ago by Gordon Smyth 50k • written 2.6 years ago by rebecca.lea.johnston • 0

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subsettingdata edgeR designmatrix

updated 21 days ago by Gordon Smyth 50k • written 22 days ago by prity6459 • 0

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designmatrix deseq2 DESeq2

updated 2.6 years ago by swbarnes2 ★ 1.4k • written 2.6 years ago by OST • 0

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903

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edgeR pairedsamples designmatrix

3.3 years ago • updated 3.2 years ago sfidemw • 0

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designmatrix RNA-seq limma

updated 3.1 years ago by Gordon Smyth 50k • written 3.1 years ago by athief ▴ 20

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853

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edger r differentialanalysis rnaseq designmatrix

updated 5.0 years ago by Aaron Lun ★ 28k • written 5.0 years ago by Beginner ▴ 60

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687

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deseq2 miRNASeq designmatrix Batch

updated 4.1 years ago by Michael Love 42k • written 4.1 years ago by anshulmbi • 0

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limma designmatrix

updated 4 weeks ago by Gordon Smyth 50k • written 5 weeks ago by avery • 0

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625

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designmatrix DifferentialExpression edgeR RNAseq

3.2 years ago nageshprabhu.k ▴ 10

14 results • Page 1 of 1

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Comment: deseq2 results by swbarnes2 ★ 1.4k

Ask the people who made the libraires if there was anything unusual in the QC of the outlier sample. Try to figure out what biologically …

Comment: Can't post a question containing code? by NATASHA • 0

did you find a solution? I´m having the same problem

Comment: error by NATASHA • 0

Please ignore, i didnt copy all the scrip

Comment: Extremely small p-values using Limma for proteomic data by James W. MacDonald 65k

If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>