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exomecopy
•
reset
0
votes
4
replies
2.9k
views
error in exomeCopy - IRanges?
IRanges
exomeCopy
IRanges
exomeCopy
updated 12.5 years ago by
love
▴ 150 • written 12.5 years ago by
Lescai, Francesco
▴ 380
0
votes
4
replies
884
views
exomeCopy compileCopyCountSegments error
exomeCopy
updated 5.6 years ago by
Michael Love
43k • written 5.6 years ago by
kkyung412
• 0
0
votes
4
replies
2.7k
views
exomeCopy - memory error
exomeCopy
exomeCopy
updated 12.4 years ago by
love
▴ 150 • written 12.4 years ago by
Lescai, Francesco
▴ 380
0
votes
3
replies
1.2k
views
exomeCopy error with compileCopyCountSegments
exomecopy
cnv
7.1 years ago
ramakrishnas
• 0
0
votes
3
replies
902
views
exomeCopy error in col name
exomecopy
updated 7.0 years ago by
Michael Love
43k • written 7.0 years ago by
chiara.rigobello
• 0
0
votes
2
replies
1.2k
views
exomeCopy - no .Internal function 'cov' error
exomeCopy
exomeCopy
updated 12.6 years ago by
Martin Morgan
25k • written 12.6 years ago by
Lescai, Francesco
▴ 380
1
vote
2
replies
1.5k
views
Journal articles for whole exome sequencing
exomecopy
exon array analysis
CODEX
9.8 years ago
kaushal Raj Chaudhary
▴ 10
0
votes
2
replies
1.7k
views
ExomeCopy error
exomeCopy
exomeCopy
updated 11.8 years ago by
Michael Love
43k • written 11.8 years ago by
Kevin Lee
▴ 40
0
votes
1
reply
824
views
exomeCopy warning and error
exomeCopy
updated 2.7 years ago by
Michael Love
43k • written 2.7 years ago by
ef.kafantari
• 0
0
votes
1
reply
1.4k
views
copyCountSegments(fit) failed exomeCopy
exomeCopy
exomeCopy
updated 12.8 years ago by
love
▴ 150 • written 12.8 years ago by
Dan Spiegelman
▴ 10
0
votes
1
reply
1.1k
views
question about using exomeCopy on a single exome sample
exomeCopy
exomeCopy
updated 11.8 years ago by
Michael Love
43k • written 11.8 years ago by
Guru Ananda
▴ 10
0
votes
1
reply
1.4k
views
exomeCopy copy number setting
cnv
exomecopy
updated 9.2 years ago by
Michael Love
43k • written 9.2 years ago by
cafelumiere12
▴ 20
0
votes
1
reply
1.1k
views
exomeCopy Posterior Probabilities
exomecopy
updated 7.3 years ago by
Michael Love
43k • written 7.3 years ago by
sruddy17
• 0
0
votes
1
reply
757
views
Discrepancy between plot colours during exomeCopy tutorial
exomeCopy
updated 2.7 years ago by
Michael Love
43k • written 2.7 years ago by
joel.wallenius
• 0
0
votes
0
replies
1.0k
views
copyCountSegments(fit) failed exomeCopy
exomeCopy
exomeCopy
12.9 years ago
love
▴ 150
0
votes
0
replies
739
views
Applying exomeCopy to call CNVs withouts controls considering batch effects
exomeCopy
CNV
WES
3.9 years ago
Cheng
• 0
0
votes
0
replies
1.1k
views
Fwd: ExomeCopy package error
Sequencing
exomeCopy
Sequencing
exomeCopy
12.2 years ago
love
▴ 150
0
votes
0
replies
1.3k
views
ExomeCopy package error
Sequencing
exomeCopy
Sequencing
exomeCopy
12.2 years ago
Guest User
★ 13k
18 results • Page
1 of 1
Recent ...
Replies
Answer: Automatically install dependencies
by
ATpoint
★ 4.7k
The BiocManager, which is sort of an extended wrapper around `install.packages`, installs all R dependencies. If you see errors then this i…
Answer: To count or not to count multi-overlapping reads?
by
Gordon Smyth
52k
> How does it handle reads that map to a gene that is located in a region that also has another gene but on the alternate strand? Overlapp…
Comment: Weird p-values using DESeq2?
by
ATpoint
★ 4.7k
This does not look like normalized counts but raw counts. Consider using `counts(dds, normalized = TRUE)` or the output of `normTransform()…
Answer: Weird p-values using DESeq2?
by
Wolfgang Huber
★ 13k
Dear Ingrid, thank you for asking. Can you provide the input count matrix (you can "pseudonymize" the biological conditions and the gene n…
Comment: How to visualize these pathways using pathview
by
ingrid.h
• 0
Yes I have seen it, thanks.
Votes
A: Fraction count for multi mapping reads; how to generate input file for Deseq2 fo
Comment: Weird p-values using DESeq2?
Comment: Overcoming confounding in batch effect correction
Answer: Store Matrix in DataFrame Cell
Answer: enrichGOgradient color change
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Jim Nemesh
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68k
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Hervé Pagès
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