Bioconductor Featurecounts

Showing : featurecounts • reset

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6.2k

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rsubread featurecounts

updated 3 months ago by Gordon Smyth 50k • written 9.2 years ago by Ryan C. Thompson ★ 7.9k

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18k

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featurecounts rsubread

updated 10 months ago by Robert • 0 • written 9.0 years ago by samuel collombet ▴ 140

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759

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featurecounts Rsubread

3 months ago isaac.vock • 0

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4.7k

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subread featureCounts

updated 9 months ago by Yang Liao ▴ 380 • written 2.9 years ago by s.muroy ▴ 10

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2.3k

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featurecounts SAM htseqcounts

updated 10 months ago by Yang Liao ▴ 380 • written 7.0 years ago by courtney.stairs • 0

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450

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featureCounts Rsubread

updated 3 months ago by Gordon Smyth 50k • written 3 months ago by tjgray4 • 0

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3.5k

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RNA-seq featureCounts ht-seq

written 3.8 years ago by ag1805x ▴ 80

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1.0k

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RNASeqData Rsubread mapping featurecounts

updated 9 months ago by James W. MacDonald 65k • written 9 months ago by vitoriastavis • 0

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1.6k

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rsubread featurecounts summarizeoverlaps

updated 5 weeks ago by isaac.vock • 0 • written 7.9 years ago by Jon Manning ▴ 90

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260

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featureCounts Rsubread

5 weeks ago • updated 20 days ago isaac.vock • 0

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273

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featureCounts Rsubread

updated 9 weeks ago by Wei Shi ★ 3.6k • written 3 months ago by Alex • 0

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672

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Rsubread featureCounts

updated 9 months ago by Yang Liao ▴ 380 • written 9 months ago by StevenE.Strong • 0

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148

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FeatureCounts Rsubread

9 weeks ago chris2.a.white • 0

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961

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rpkm edgeR featureCounts

8 months ago Gordon Smyth 50k

14 results • Page 1 of 1

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Comment: DSS CpG coverage threshold by j.gilbert • 0

Might be a bit late for the original poster :') but in case anyone else is wondering, the DSS user guide says: *Q: Do I need to filter out…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Segmentation is of the whole genome, I'll write some code for doing this later today.

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

I'll take a look later. For next time, I've edited your post by enclosing the code in triple backticks (on their own link). This properly …

Comment: deseq2 results by sajadahmad41454 • 0

could you please tell me if the results are fine or not? ![pca summary][1] ![pca plot][2] [1]: /media/images/ee7d8693-bcbe-4a7a-a566-d3…

Answer: normalization using Deseq2 by ATpoint ★ 4.1k

counts(dds, normalized=TRUE)

Votes

A: Volcanoplot with limma - RAW P-values or Adj.P-Values

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Answer: minfi latest update for EPIC V2 chip

A: Error in DESeqDataSet : some values in assay are not integers

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