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flowSOM
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1.1k
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multiple errors in flowSOM- with readinput and metaClustering_consensus
flowcore
flowsom
7.7 years ago
jeremyeadler
• 0
1
vote
3
replies
534
views
FlowSOM Error in flowCore::read.FCS
FlowSOM
updated 5 months ago by
SamGG
▴ 350 • written 5 months ago by
agus_rizzo
• 0
0
votes
2
replies
288
views
FlowSOM error system.file()
FlowSOM
updated 5 months ago by
SamGG
▴ 350 • written 5 months ago by
agus_rizzo
• 0
0
votes
0
replies
1.4k
views
Error from FlowSom to Cytofast
Cytofast
FlowSom
CyTOF
fcs files
3.5 years ago
domenico.somma
• 0
1
vote
6
replies
1.6k
views
Running FlowSOM in R problem
FlowSOM
updated 3.5 years ago by
sofie.vangassen
▴ 10 • written 3.5 years ago by
Václav
• 0
0
votes
0
replies
907
views
Help with FlowSOM
FlowSOM
2.8 years ago
ismail.ameran
• 0
0
votes
0
replies
780
views
Job:
Post-Doctoral Bioinformatics Research Scientist / Bioinformatician II
flowWorkspace
CytoGLMM
FlowSOM
2.4 years ago
hbolouri
• 0
1
vote
1
reply
481
views
FlowSOM with unrelated channels
FlowSOM
cytofWorkflow
updated 13 months ago by
helucro
▴ 70 • written 13 months ago by
Anirban
• 0
0
votes
0
replies
245
views
Identifying populations within a FlowSOM tree
FlowSOM
5 months ago
agus_rizzo
• 0
0
votes
2
replies
864
views
FlowSOM dependencies - cytoML and flowutils
FlowSOM
2.5 years ago
jakub.savara
• 0
0
votes
0
replies
1.4k
views
FlowSOM and ConsensusClusterPlus: reproducibility issue
flowsom
consensusclusterplus
7.1 years ago
Lukas Weber
• 0
0
votes
1
reply
1.1k
views
[flowSOM] extracting data from tree
flowcytometry
flowSOM
flowSET
flowFrame
5.0 years ago
fabrizio.benedetti.82
• 0
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Answer: Dominance Index for Shotgun Metagenomics Data
by
Leo Lahti
▴ 30
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative?
by
Michael Love
41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Votes
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
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