Bioconductor Gaia

Showing : gaia • reset

votes

replies

3.9k

views

gaia cnv

updated 3.3 years ago by juanmafernandezm86 • 0 • written 6.4 years ago by rina ▴ 30

votes

replies

812

views

gaia load_cnv

5.8 years ago Talip ▴ 10

votes

replies

1.5k

views

gaia genomicranges iranges

updated 6.4 years ago by Sandro Morganella ▴ 40 • written 6.4 years ago by Talip ▴ 10

votes

replies

2.9k

views

tcgabiolinks tcga cnv mac os x gaia

updated 6.4 years ago by rreck ▴ 20 • written 6.4 years ago by rina ▴ 30

votes

replies

1.9k

views

memory problem gaia

updated 7.1 years ago by Sandro Morganella ▴ 40 • written 7.1 years ago by drusmanbashir • 0

votes

replies

1.2k

views

gaia gaia

13.1 years ago viritha kaza ▴ 580

6 results • Page 1 of 1

Recent ...

Replies

Answer: DESeq error: counts matrix should be numeric, currently it has mode: character by ATpoint ★ 4.6k

R thinks your data are characters (e.g. "1", "2", instead of 1, 2) so given that your `counts_data` indeed only contains counts, do: `mo…

Comment: Any tools to convert .gff to .gtf format by ControlF5 • 0

Yes, the Appsierra team recently built a tool to convert .gff to .gtf format. [ControlF5][1] is providing the best software testing service…

Comment: EuroBioC2024 abstract submission is open! by Alan Downey • 0

EuroBioC2024 has opened its abstract submission process, presenting an exciting opportunity for researchers to contribute to groundbreaking…

Comment: ChAMP.DMR error - Error in makeGenomicRatioSetFromMatrix by O'Brien • 0

Consult the ChAMP.DMR documentation for more information on supported array types and expected data formats: https://bioconductor.org/packa…

Answer: combining raw counts and estimated counts by O'Brien • 0

It is possible to combine raw counts from TCGA and estimated counts from GEO datasets (Kalisto pseudoalignment) while mitigating batch effe…

Votes

A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor

A: RNA-seq Normalisation - normalise all samples in experiment or only the ones use

Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?

Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio

Awards • All