Bioconductor Glmlrt()

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edger design matrix glmlrt() glmQFTest() paired design

6.9 years ago oakhamwolf • 0

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2.5k

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EdgeR glmlrt() ql f-test

8.9 years ago • updated 8.2 years ago elineverbon ▴ 20

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edger contrast covariate glmlrt()

8.4 years ago Jeff Skinner • 0

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edger differential gene expression glmlrt()

8.8 years ago • updated 8.7 years ago simarsidhu25 • 0

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edger differential gene expression glmlrt()

8.8 years ago simarsidhu25 • 0

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edger glmfit glmlrt()

updated 9.8 years ago by Aaron Lun ★ 29k • written 9.8 years ago by cadeans • 0

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edger glmlrt() differential expression design and contrast matrix

updated 10.2 years ago by Gordon Smyth 53k • written 10.2 years ago by carlgdeboer • 0

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4.6k

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edger rnaseq glmlrt()

updated 10.5 years ago by James W. MacDonald 68k • written 10.5 years ago by MBWatson • 0

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edgeR glmLRT() multiple factor design multiple testing correction

updated 10.7 years ago by Aaron Lun ★ 29k • written 10.7 years ago by Ekarl2 ▴ 80

9 results • Page 1 of 1

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Comment: EuroBioC2024 abstract submission is open! by Rajika • 0

Abstract submission is now open for EuroBioC2024 in Oxford (Sep 4-6)! If you are interested in contributing a short talk, package demo, pos…

Comment: DESeq2 interactions by Michael • 0

Brilliant, thank you!

Answer: readBam vs read_bam_insert_metrics by lincolnprice964 ▴ 10

Yes read_bam_insert_metrics() can take input directly from a BAM file or from an object created with readBam(). Use whichever fits best in …

Comment: DESeq2 interactions by lincolnprice964 ▴ 10

If you want HP vs CNP directly, set up the interaction model: dds <- DESeqDataSetFromTximport(genes.salmon, coldata, ~ pollution + temp + …

Comment: Heatmap of the Count Matrix by ArnulfoByrd • 0

Perhaps PCA loadings offer a more comprehensive perspective. Now, thinking back, I recall struggling with a similar data reduction dilemma …

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Comment: DESeq2 interactions

Answer: Limpa Pipeline Order

A: How barcode-plot enrichment is calculated?

Answer: ROAST compare results with complex design

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