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gmapr
•
reset
0
votes
0
replies
481
views
gmapR source package contains x86_64 binaries
gmapR
19 months ago
Tom Lin
• 0
0
votes
1
reply
893
views
gmapR install failed
gmapR
updated 5.1 years ago by
Martin Morgan
25k • written 5.1 years ago by
conbward
• 0
1
vote
4
replies
1.4k
views
How can I create a GmapGenome that doesn't start at index 1?
gmapR
6.9 years ago
Kyle Johnsen
▴ 30
0
votes
5
replies
1.8k
views
Error in gmapR: gsnap not functioning
software error
gmapr
updated 7.1 years ago by
Michael Lawrence
★ 11k • written 7.1 years ago by
Amer Ghalawinji
• 0
0
votes
3
replies
1.5k
views
cmetindex missing in gmapr? Not possible to do bisulfite alignments
gmapr
updated 8.1 years ago by
Michael Lawrence
★ 11k • written 8.1 years ago by
karl.nordstroem
• 0
0
votes
4
replies
2.1k
views
Can I create a GmapGenome with a relative file path?
gmapgenome
gmapr
fastafile
updated 8.6 years ago by
Michael Lawrence
★ 11k • written 8.6 years ago by
Kyle Johnsen
▴ 30
1
vote
4
replies
1.7k
views
gmapR failure to build TP53Genome in osx
gmapR
9.0 years ago
jls2282
• 0
3
votes
6
replies
2.0k
views
gmapR fills my tmp directory
gmapr
gmapgenome
updated 9.9 years ago by
Michael Lawrence
★ 11k • written 9.9 years ago by
sean.taylor
• 0
0
votes
10
replies
2.7k
views
Running gmap tool via gmapR package?
gmapR
updated 10.1 years ago by
Michael Lawrence
★ 11k • written 10.1 years ago by
Thomas Sandmann
▴ 90
1
vote
17
replies
2.8k
views
VariantTools problem causing R crash
varianttools
gmapr
updated 10.1 years ago by
Michael Lawrence
★ 11k • written 10.1 years ago by
Johannes Rainer
★ 2.1k
1
vote
4
replies
1.7k
views
Create a GmapGenome from a FaFile from AnnotationHub
gmapr
gmapgenome
annotationhub
fafile
updated 10.1 years ago by
Michael Lawrence
★ 11k • written 10.1 years ago by
Johannes Rainer
★ 2.1k
0
votes
3
replies
3.0k
views
Problems to create GmapGenome - gmapR
gmapR
GmapGenome
error
create
10.6 years ago
lelemraposo
▴ 10
0
votes
0
replies
1.2k
views
gmapR: GsnapParam, does is support the --splicesites (-s) flag
gmapR
10.9 years ago
Chao-Jen Wong
▴ 580
0
votes
5
replies
2.6k
views
Complete variant toolbox: gmapR/VariantTools/VariantAnnotation
BiocViews
VariantAnnotation
Annotation
biocViews
Rsubread
VariantAnnotation
gmapR
BiocViews
12.0 years ago
Thomas Girke
★ 1.7k
0
votes
1
reply
1.6k
views
gmapR problem using a GmapGenome package with gsnap()
GO
BSgenome
BSgenome
gmapR
GO
BSgenome
BSgenome
gmapR
updated 12.6 years ago by
Michael Lawrence
★ 11k • written 12.6 years ago by
Robert Castelo
★ 3.4k
0
votes
0
replies
1.8k
views
gmapR for R 3.0.0 installation problem?
gmapR
gmapR
12.7 years ago
Dan Tenenbaum
★ 8.2k
0
votes
2
replies
1.5k
views
where is exonsOnTP53Genome defined
gmapR
gmapR
updated 12.9 years ago by
Martin Morgan
25k • written 12.9 years ago by
Guest User
★ 13k
0
votes
2
replies
2.6k
views
gmapR/gsnap crashes
gmapR
gmapR
updated 12.9 years ago by
Michael Lawrence
★ 11k • written 12.9 years ago by
Tim Triche
★ 4.2k
0
votes
0
replies
1.4k
views
regarding mapping package
Cancer
genomes
Rsubread
gmapR
Cancer
genomes
Rsubread
gmapR
13.3 years ago
Martin Morgan
25k
19 results • Page
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Comment: Bioinformatician at the Lausanne University Hospital
by
TikTsokaasocissalpc
• 0
The Random Word Generator in Italian is a useful tool for generating ideas and exploring new approaches, much like the innovative research …
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
TikTsokaasocissalpc
• 0
If you want to share your research progress and microbiome discoveries with colleagues or friends, [snaptroid android][1] download free mak…
Answer: Limma-voom sample weights and impact on DEG numbers
by
Gordon Smyth
53k
I recommend that you always use voomLmFit() instead of the earlier voom() or voomWithQualityWeights() functions. Personally, I would use sa…
Answer: wgcna module preseravtion taking too long?
by
ATpoint
★ 5.0k
WGCNA is not a Bioconductor package, you won't get an answer here. Consider biostars.org or the r/bioinformatics reddit. Note that 10 sampl…
Answer: Question about RE-agnostic mode for intact Hi-C and Micro-C normalization(HiCDCP
by
victor04052024
• 0
You write quite well, and the content is very interesting. I'll provide you a link to my page [granny 2](https://granny2.io).
Votes
Limma-voom sample weights and impact on DEG numbers
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
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Dario Strbenac
★ 1.6k
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Nikos Ignatiadis
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