Bioconductor Gmapr

Showing : gmapr • reset

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2.5k

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gmapR GmapGenome error create

8.9 years ago lelemraposo • 0

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2.2k

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gmapR gmapR

updated 11.2 years ago by Michael Lawrence ★ 11k • written 11.2 years ago by Tim Triche ★ 4.2k

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1.9k

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gmapR

updated 8.4 years ago by Michael Lawrence ★ 11k • written 8.4 years ago by Thomas Sandmann ▴ 90

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1.8k

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varianttools gmapr

updated 8.4 years ago by Michael Lawrence ★ 11k • written 8.4 years ago by Johannes Rainer ★ 2.0k

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1.8k

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BiocViews VariantAnnotation Annotation biocViews Rsubread VariantAnnotation gmapR BiocViews

10.4 years ago Thomas Girke ★ 1.7k

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1.5k

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gmapR gmapR

11.1 years ago Dan Tenenbaum ★ 8.2k

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1.4k

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gmapgenome gmapr fastafile

updated 6.9 years ago by Michael Lawrence ★ 11k • written 7.0 years ago by Kyle Johnsen ▴ 30

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1.4k

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gmapr gmapgenome

updated 8.3 years ago by Michael Lawrence ★ 11k • written 8.3 years ago by sean.taylor • 0

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1.3k

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GO BSgenome BSgenome gmapR GO BSgenome BSgenome gmapR

updated 11.0 years ago by Michael Lawrence ★ 11k • written 11.0 years ago by Robert Castelo ★ 3.3k

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1.2k

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gmapR

7.4 years ago jls2282 • 0

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1.2k

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software error gmapr

updated 5.4 years ago by Michael Lawrence ★ 11k • written 5.4 years ago by Amer Ghalawinji • 0

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1.2k

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gmapR gmapR

updated 11.2 years ago by Martin Morgan 25k • written 11.2 years ago by Guest User ★ 13k

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1.2k

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gmapr gmapgenome annotationhub fafile

updated 8.4 years ago by Michael Lawrence ★ 11k • written 8.4 years ago by Johannes Rainer ★ 2.0k

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1.1k

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Cancer genomes Rsubread gmapR Cancer genomes Rsubread gmapR

11.7 years ago Martin Morgan 25k

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982

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gmapR

5.2 years ago Kyle Johnsen ▴ 30

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929

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gmapr

updated 6.5 years ago by Michael Lawrence ★ 11k • written 6.5 years ago by karl.nordstroem • 0

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899

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gmapR

9.3 years ago Chao-Jen Wong ▴ 580

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552

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gmapR

updated 3.5 years ago by Martin Morgan 25k • written 3.5 years ago by conbward • 0

18 results • Page 1 of 1

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Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …

Answer: PCA plot suggestions by Michael Love 41k

For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10

Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…

Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k

Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…

Answer: ATACseq merge peaks by ATpoint ★ 4.0k

That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…

Votes

Answer: Math expression in shapeCustom legend in EnhancedVolcano

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length