Showing : go • reset
0
votes
0
replies
1.8k
views
Problem to download Kegg map from KEGGprofile package
GO KEGGprofile GO KEGGprofile
12.9 years ago gregory voisin ▴ 430
0
votes
4
replies
1.2k
views
DEXSeq all p-values are 1
GO DEXSeq GO DEXSeq
updated 12.9 years ago by ★ 13k • written 12.9 years ago by ★ 13k
0
votes
0
replies
1.3k
views
geneplotter - buildChromLoc for arrays with no .db
GO geneplotter GO geneplotter
12.9 years ago Lavinia Gordon ▴ 480
0
votes
1
reply
1.4k
views
geneplotter - buildChromLoc for arrays with no .db package
GO geneplotter GO geneplotter
updated 12.9 years ago by ★ 7.2k • written 12.9 years ago by ▴ 480
0
votes
7
replies
1.9k
views
Problem loading BED file with BED2RangedData
GO ChIPpeakAnno GO ChIPpeakAnno
updated 12.9 years ago by ★ 1.3k • written 12.9 years ago by ▴ 280
0
votes
0
replies
806
views
Gene Set Definition GSCA package
GO GO
12.9 years ago TriS ▴ 200
0
votes
4
replies
1.9k
views
AnnotationForge example does not work
GO Cancer ChipName probe affy GO Cancer ChipName probe affy
updated 13.0 years ago by ▴ 120 • written 13.0 years ago by ★ 13k
0
votes
0
replies
1.0k
views
goseq: biased distribution of p-values
GO GenomicFeatures goseq GO GenomicFeatures goseq
13.0 years ago Joachim Jacob ▴ 10
0
votes
2
replies
1.0k
views
trackHubs in rtracklayer
GO rtracklayer GO rtracklayer
updated 13.0 years ago by ★ 11k • written 13.0 years ago by ★ 4.2k
0
votes
1
reply
1.3k
views
GeneSetCollection with GOCollection and ontology argument
GO GO
updated 13.0 years ago by 25k • written 13.0 years ago by ▴ 150
0
votes
1
reply
761
views
affycoretools()
GO GO
updated 13.0 years ago by 68k • written 13.0 years ago by ★ 13k
0
votes
0
replies
785
views
missing probe_id in ath1121501.db
GO ath1121501 GO ath1121501
13.0 years ago Guest User ★ 13k
0
votes
4
replies
1.5k
views
GO Term Enrichment Analysis for ath1121501
Annotation GO ath1121501 probe Annotation GO ath1121501 probe
13.0 years ago Guest User ★ 13k
0
votes
5
replies
1.8k
views
GO question
Annotation GO Annotation GO
updated 13.0 years ago by ▴ 370 • written 13.0 years ago by ▴ 440
0
votes
0
replies
1.1k
views
illuminaRatv1.db dependency bug
GO illuminaRatv1 GO illuminaRatv1
13.0 years ago Arnar Flatberg ▴ 70
0
votes
0
replies
1.6k
views
get synthetic exon dataset with easyRNASeq
RNASeq Alignment Annotation Normalization GO PROcess GenomicRanges DEXSeq easyRNASeq GO
13.0 years ago delhomme@embl.de ★ 1.2k
0
votes
2
replies
2.0k
views
Error using Homo.sapiens AnnotationDbi package with GenomicFeatures
GO AnnotationDbi GO AnnotationDbi
updated 13.0 years ago by ★ 7.2k • written 13.0 years ago by ▴ 60
0
votes
8
replies
2.9k
views
CDF for GeneChip miRNA 2 array - Is there a miRNA 3 CDF?
miRNA GO cdf affy arrayQualityMetrics miRNA GO cdf affy arrayQualityMetrics
updated 13.0 years ago by 68k • written 13.0 years ago by ▴ 290
0
votes
1
reply
1.6k
views
(minfi) Return value from dmpFinder
GO minfi GO minfi
updated 13.0 years ago by ★ 6.5k • written 13.0 years ago by ▴ 440
2
votes
1
reply
2.2k
views
medain global normalize - argument matrix
Normalization GO Normalization GO
updated 13.0 years ago by 53k • written 13.0 years ago by 68k
0
votes
1
reply
1.3k
views
GO annotation in R
Annotation GO Annotation GO
updated 13.0 years ago by ★ 7.2k • written 13.0 years ago by ★ 13k
0
votes
4
replies
3.0k
views
goseq analysis
GO graph edgeR goseq GO graph edgeR goseq
updated 13.0 years ago by ▴ 100 • written 13.0 years ago by ▴ 210
0
votes
0
replies
1.3k
views
GAGE: script
GO gage GO gage
13.0 years ago Guest User ★ 13k
0
votes
0
replies
1.2k
views
covariate information
GO GO
13.0 years ago W. Evan Johnson ▴ 870
0
votes
1
reply
1.5k
views
How to get Gene ontology (GO) terms per probe
GO Clustering rat2302 annotate GO Clustering rat2302 annotate
updated 13.0 years ago by 68k • written 13.1 years ago by ★ 13k
0
votes
3
replies
1.6k
views
Annotation using the affy package
GO probe affy GO probe affy
updated 13.1 years ago by 68k • written 13.1 years ago by ★ 13k
0
votes
0
replies
1.2k
views
help ith GeneAnswers / annotation package
Annotation GO oligo GeneAnswers Annotation GO oligo GeneAnswers
13.1 years ago Ingrid Mercier ▴ 60
0
votes
4
replies
1.5k
views
Creating annotation package with a new database schema
Annotation GO Organism Annotation GO Organism
updated 13.1 years ago by 16k • written 13.1 years ago by ▴ 30
0
votes
0
replies
830
views
limma and legacy data
Microarray GO graph limma Microarray GO graph limma
13.1 years ago Simon Melov ▴ 340
0
votes
1
reply
1.3k
views
ANOVA for gene ontology analysis
GO GO
updated 13.1 years ago by 53k • written 13.1 years ago by ▴ 240
0
votes
3
replies
1.7k
views
ChIPpeakAnno problem w getAllPeakSequence()
GO annotate ChIPpeakAnno GO annotate ChIPpeakAnno
updated 13.1 years ago by ★ 1.3k • written 13.1 years ago by ▴ 50
0
votes
1
reply
1.3k
views
Reading in of Exon Array CEL files for normalization/ workflow
Normalization GO cdf affy Normalization GO cdf affy
updated 13.1 years ago by 21k • written 13.1 years ago by ▴ 180
0
votes
3
replies
1.4k
views
GOstats different goDag size just changing the
Annotation GO GOstats Annotation GO GOstats
updated 13.1 years ago by 68k • written 13.1 years ago by ▴ 370
0
votes
2
replies
2.6k
views
limma topTable doesn't work without replicates [was: Help with limma]
GO limma GO limma
updated 13.1 years ago by ▴ 40 • written 13.1 years ago by 53k
0
votes
0
replies
1.2k
views
limma topTable doesn't work without replicates [was: Help with limma]
GO limma GO limma
13.1 years ago Gordon Smyth 53k
0
votes
6
replies
1.8k
views
Need help: no MTC possible
Normalization GO Normalization GO
updated 13.1 years ago by 68k • written 13.1 years ago by ▴ 290
0
votes
0
replies
1.1k
views
get synthetic exon dataset with easyRNASeq
RNASeq Annotation Normalization GO PROcess easyRNASeq RNASeq Annotation Normalization GO
13.1 years ago delhomme@embl.de ★ 1.2k
0
votes
2
replies
2.1k
views
odd results with pvclust
GO GO
updated 13.1 years ago by ▴ 290 • written 13.1 years ago by ▴ 10
0
votes
1
reply
1.2k
views
Annotation databases--unable to get annotations
Annotation GO hgu95av2 probe limma Annotation GO hgu95av2 probe limma
updated 13.1 years ago by 68k • written 13.1 years ago by ★ 13k
0
votes
2
replies
1.4k
views
Profiles
GO goProfiles GO goProfiles
updated 13.1 years ago by ★ 13k • written 13.1 years ago by ★ 13k
0
votes
4
replies
1.5k
views
(no subject)
RNASeq Normalization GO DESeq RNASeq Normalization GO DESeq
updated 13.1 years ago by ★ 2.0k • written 13.1 years ago by ▴ 100
0
votes
0
replies
1.1k
views
DESeq - skewed MAplots and other problems
RNASeq Normalization GO DESeq RNASeq Normalization GO DESeq
13.1 years ago Michal Lulu ▴ 100
0
votes
2
replies
8.4k
views
replace a value in a matrix using index
GO GO
updated 13.1 years ago by 68k • written 13.1 years ago by ▴ 20
0
votes
1
reply
1.8k
views
enrichment + topGO
Annotation GO topGO Annotation GO topGO
updated 13.1 years ago by ▴ 750 • written 13.1 years ago by ▴ 20
0
votes
0
replies
1.5k
views
ChipPeakAnno - slightly different results between makeVennDiagram and findPeakOverlaps
Genetics GO ChIPpeakAnno Genetics GO ChIPpeakAnno
13.1 years ago Julie Zhu ★ 4.3k
0
votes
2
replies
1.5k
views
which R package can be used to do all the GO analysis
Annotation GO Annotation GO
updated 13.1 years ago by ▴ 750 • written 13.1 years ago by ★ 2.0k
0
votes
1
reply
1.3k
views
AnnotationDBI
GO ChipName probe affy GO ChipName probe affy
updated 13.1 years ago by 68k • written 13.1 years ago by ★ 13k
0
votes
0
replies
1.1k
views
GOSEQ help
Pathways GO goseq Pathways GO goseq
13.1 years ago Emma Quinn ▴ 20
0
votes
1
reply
2.2k
views
Bioconductor Digest, Vol 115, Issue 22
Transcription Sequencing miRNA SmallRNA Annotation Normalization GO Cancer Organism edgeR
updated 13.1 years ago by ★ 13k • written 13.1 years ago by ▴ 10
0
votes
4
replies
1.5k
views
GO annotation
Annotation GO Annotation GO
updated 13.1 years ago by ★ 7.2k • written 13.1 years ago by ▴ 420
1,936 results • Page 11 of 39
Recent ...
Replies
Comment: Save the Date: BioC2026 by eja.gsssssswwse.r.m • 0
Que notícia incrivel sobre o BioC2026 Para quem gosta de aproveitar o conteudo online, também e possvel Baixar [snaptube versão antiga][1] …
Comment: Ensembl 115 has been released! by eja.gsssssswwse.r.m • 0
Keeping up with Ensembls latest release ensures access to cutting-edge genomic information. For those balancing research and leisure, a mob…
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Answer: gene Set with high AUC score but no cells assigned to cell type by Kevin Blighe ★ 4.0k
Hi, You have correctly identified the issue: AUCell's automatic threshold selection is conservative by design, aiming for specificity to…
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
Awards • All
Scholar to shepherl 4.2k
Scholar to James W. MacDonald 68k
Popular Question to Daniel Cameron ▴ 40
Popular Question to Peter Hickey ▴ 760
Popular Question to edward.esiribloom • 0
Locations • All
Hong Kong, 1 hour ago
United States, 1 hour ago
China, 2 hours ago
Singapore, 3 hours ago
Pittsburgh, United States, 4 hours ago
Traffic: 876 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6